Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h15
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SN85 Cluster: Chromosome 8 SCAF14543, whole genome sh...    32   6.8  
UniRef50_A2WKC0 Cluster: Putative uncharacterized protein; n=4; ...    32   6.8  
UniRef50_A4HUQ7 Cluster: Chromosome 10; n=6; Trypanosomatidae|Re...    32   6.8  

>UniRef50_Q4SN85 Cluster: Chromosome 8 SCAF14543, whole genome shotgun
            sequence; n=2; Euteleostomi|Rep: Chromosome 8 SCAF14543,
            whole genome shotgun sequence - Tetraodon nigroviridis
            (Green puffer)
          Length = 2188

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +1

Query: 157  LKLVKDKRHRSSSSLAGALDCTRSEKKLDIRASIPEVDDQFALAEARCDDLQ 312
            L L +D     S+ L G L C R  +  D+    PE +DQ+A  E RC D +
Sbjct: 1432 LALQEDDESSGSAVLRGELHCQRFSQAGDLHLW-PEENDQWASPERRCRDTE 1482


>UniRef50_A2WKC0 Cluster: Putative uncharacterized protein; n=4;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 553

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +1

Query: 160 KLVKDKRHRSSSSLAGALDCTRSEKKLDIRASIPEVDDQFALAEARCDD 306
           +L  D   R + S+AG LD +R    LD+ AS+ ++ DQF L    C +
Sbjct: 64  ELRSDVAIRGADSVAGRLDISR----LDVSASLDQICDQFGLPSGICGE 108


>UniRef50_A4HUQ7 Cluster: Chromosome 10; n=6; Trypanosomatidae|Rep:
           Chromosome 10 - Leishmania infantum
          Length = 275

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 82  CLFKH*HLAVELCVLCKFQVIMGDCLKLVKDK 177
           C+  H  +  E+C  CK QV+  DC K ++ +
Sbjct: 225 CMLCHNRICTEICYPCKHQVLCKDCAKSIRGR 256


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,403,286
Number of Sequences: 1657284
Number of extensions: 6631123
Number of successful extensions: 14186
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14185
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)