Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h15
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41058| Best HMM Match : FAT (HMM E-Value=0.0082)                    28   4.0  
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  

>SB_41058| Best HMM Match : FAT (HMM E-Value=0.0082)
          Length = 628

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 187 SSSSLAGALDCTRSEKKLDIRASIPEVDDQFALAEARCDDLQDKI 321
           +S S  G L  +     +DI +SI E+D  + +   R  DL+ +I
Sbjct: 299 ASQSTDGGLSTSYQSLLVDIYSSIAELDSVYGVGAGRLADLESRI 343


>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3934

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 151  DCLKLVKDKRHRSSSSLAGALDCTRSEKKLDIRASIPEVDDQFALAE 291
            D +K++KD  H   +S+   L C++ E  L IR  +   D+ F  ++
Sbjct: 3731 DQIKILKDSYHLELASVQADLKCSQMENLLKIRRDMGN-DNSFTASQ 3776


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,536,586
Number of Sequences: 59808
Number of extensions: 214035
Number of successful extensions: 504
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)