Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h12
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81462-2|CAB03841.1|  263|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U88310-2|AAB42338.2|  635|Caenorhabditis elegans Hypothetical pr...    29   3.2  

>Z81462-2|CAB03841.1|  263|Caenorhabditis elegans Hypothetical
           protein C04H5.2 protein.
          Length = 263

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 243 DYITKGVRKMIGRIYSVSDRVRDKIAESTMALDNP 347
           D+ITK ++  IG I    DR++    +++  ++NP
Sbjct: 133 DHITKTIKSTIGAIALAGDRIKQCSTKNSTIIENP 167


>U88310-2|AAB42338.2|  635|Caenorhabditis elegans Hypothetical
           protein C24G7.2 protein.
          Length = 635

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 125 FFLPHCVMCVLYSSVIVFRSFCCLNLRFGFYIFHYLK 15
           F  P+C  C    + +V+R++     +F    FHYLK
Sbjct: 434 FQTPNCKACAQQCNSLVYRAYNSYGSQFSAGAFHYLK 470


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,371,622
Number of Sequences: 27780
Number of extensions: 297832
Number of successful extensions: 762
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)