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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h11
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000197-7|AAU20839.1|  445|Caenorhabditis elegans Star (rna bin...    87   1e-17
AF000197-8|AAB52897.2|  328|Caenorhabditis elegans Star (rna bin...    85   3e-17
AF000197-6|AAP68907.1|  403|Caenorhabditis elegans Star (rna bin...    85   3e-17
AF106574-2|AAM81088.1|  315|Caenorhabditis elegans Hypothetical ...    75   3e-14
AF106574-1|AAY44015.1|  317|Caenorhabditis elegans Hypothetical ...    75   3e-14
Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical pr...    75   5e-14
U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.        75   5e-14
U10438-13|ABB88243.1|  235|Caenorhabditis elegans Hypothetical p...    56   2e-08
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    54   9e-08
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    50   2e-06
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    50   2e-06
Z99281-18|CAD56258.1|  380|Caenorhabditis elegans Hypothetical p...    49   3e-06
AF047659-9|AAC04421.1|  254|Caenorhabditis elegans Hypothetical ...    47   1e-05
Z73969-19|CAJ43440.1|  548|Caenorhabditis elegans Hypothetical p...    39   0.004
Z73969-2|CAA98233.1|  611|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z73969-1|CAA98232.1|  589|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z77132-1|CAB00859.1|  278|Caenorhabditis elegans Hypothetical pr...    38   0.006
U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.        30   1.7  
AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess...    30   1.7  
AF003139-8|AAK73873.2|  443|Caenorhabditis elegans Muscle excess...    30   1.7  
Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome re...    29   3.0  
U80453-5|AAK31443.1|  378|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p...    27   9.1  
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p...    27   9.1  

>AF000197-7|AAU20839.1|  445|Caenorhabditis elegans Star (rna
           binding protein) familyprotein 2, isoform c protein.
          Length = 445

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
 Frame = +3

Query: 171 GYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKL 344
           G +SG  +   T    +    NG    +  + + EY+ +LL +K +L    + F    +L
Sbjct: 37  GPSSGPPQVTITPSGVQSGSANGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERL 96

Query: 345 IDQEVTKVQA---SGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGN 515
            D+E+ KV+        +K+S  +                   EHP +NFVG++LGP+G 
Sbjct: 97  ADEEINKVRVVLFQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGM 156

Query: 516 TMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLXVEI 662
           T KQL+++T CK+ V GRGSMRD++KEE  R    P + HL+++L V I
Sbjct: 157 TAKQLEQETGCKIMVRGRGSMRDKKKEELNRGK--PNWEHLSEELHVLI 203


>AF000197-8|AAB52897.2|  328|Caenorhabditis elegans Star (rna
           binding protein) familyprotein 2, isoform a protein.
          Length = 328

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 5/148 (3%)
 Frame = +3

Query: 234 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 398
           NG    +  + + EY+ +LL +K +L    + F    +L D+E+ KV+        +K+S
Sbjct: 16  NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75

Query: 399 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSM 578
             +                   EHP +NFVG++LGP+G T KQL+++T CK+ V GRGSM
Sbjct: 76  APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135

Query: 579 RDRQKEEELRQSLDPKYSHLADDLXVEI 662
           RD++KEE  R    P + HL+++L V I
Sbjct: 136 RDKKKEELNRGK--PNWEHLSEELHVLI 161


>AF000197-6|AAP68907.1|  403|Caenorhabditis elegans Star (rna
           binding protein) familyprotein 2, isoform b protein.
          Length = 403

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 5/148 (3%)
 Frame = +3

Query: 234 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 398
           NG    +  + + EY+ +LL +K +L    + F    +L D+E+ KV+        +K+S
Sbjct: 16  NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75

Query: 399 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSM 578
             +                   EHP +NFVG++LGP+G T KQL+++T CK+ V GRGSM
Sbjct: 76  APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135

Query: 579 RDRQKEEELRQSLDPKYSHLADDLXVEI 662
           RD++KEE  R    P + HL+++L V I
Sbjct: 136 RDKKKEELNRGK--PNWEHLSEELHVLI 161


>AF106574-2|AAM81088.1|  315|Caenorhabditis elegans Hypothetical
           protein E02D9.1b protein.
          Length = 315

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = +3

Query: 468 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 647
           HP FNF+GK+LGPKG T++ L +   C + +LGRGS +DR+KE EL  S DP+++H +  
Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGP 199

Query: 648 LXVEI 662
           L V++
Sbjct: 200 LHVKV 204


>AF106574-1|AAY44015.1|  317|Caenorhabditis elegans Hypothetical
           protein E02D9.1c protein.
          Length = 317

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = +3

Query: 468 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 647
           HP FNF+GK+LGPKG T++ L +   C + +LGRGS +DR+KE EL  S DP+++H +  
Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGP 199

Query: 648 LXVEI 662
           L V++
Sbjct: 200 LHVKV 204


>Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical
           protein T23G11.3 protein.
          Length = 463

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = +3

Query: 261 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 431
           E   EY+ +L+ EK  + L    F    +L+D E+ +V+ +   T+  +  +        
Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203

Query: 432 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQ 611
                      E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE   R 
Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRG 263

Query: 612 SLDPKYSHLADDLXV 656
             +  + HL DDL V
Sbjct: 264 KAN--WEHLEDDLHV 276


>U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.
          Length = 463

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = +3

Query: 261 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 431
           E   EY+ +L+ EK  + L    F    +L+D E+ +V+ +   T+  +  +        
Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203

Query: 432 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQ 611
                      E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE   R 
Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRG 263

Query: 612 SLDPKYSHLADDLXV 656
             +  + HL DDL V
Sbjct: 264 KAN--WEHLEDDLHV 276


>U10438-13|ABB88243.1|  235|Caenorhabditis elegans Hypothetical
           protein B0280.17 protein.
          Length = 235

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 26/62 (41%), Positives = 42/62 (67%)
 Frame = +3

Query: 480 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLXVE 659
           N VG+L+GP+G T++QL++D  CK+ + G+G  +D  KEE LR+ +   + HL + + V 
Sbjct: 129 NPVGRLIGPRGMTIRQLEKDLGCKLFIRGKGCTKDDAKEERLRERVG--WEHLKEPIHVM 186

Query: 660 IS 665
           IS
Sbjct: 187 IS 188


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 24/56 (42%), Positives = 39/56 (69%)
 Frame = +3

Query: 465 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYS 632
           ++PK+NFVG++LGP+G T+KQL+++T C++ V GR S      E +  +S  P +S
Sbjct: 81  KYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRASTTASNPESKPNKS-TPSFS 135


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = +3

Query: 306 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 485
           +LN  +     +L      K+QA  +I  + K    +R               + P  NF
Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319

Query: 486 VGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 584
           VG L+GP+GNT+K L+ +T  K+ + G+GS+++
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = +3

Query: 306 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 485
           +LN  +     +L      K+QA  +I  + K    +R               + P  NF
Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319

Query: 486 VGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 584
           VG L+GP+GNT+K L+ +T  K+ + G+GS+++
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352


>Z99281-18|CAD56258.1|  380|Caenorhabditis elegans Hypothetical
           protein Y57G11C.36 protein.
          Length = 380

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
 Frame = +3

Query: 138 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKL-- 311
           L+++A+K+  +   +     ++ +      + + +E  K       Y+  L  EK +L  
Sbjct: 14  LLRLAEKHQHSSLLTPPPSDDSQKSLKSTSNHSDQEMSKNLHDVEAYIDALKGEKHQLAQ 73

Query: 312 -NNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFV 488
            ++  F     LID+E+ KV  +      S+                     + P +NFV
Sbjct: 74  YSSGGFNHVFNLIDKEIQKVGGNDAHDGGSQ----MSGDGSMLTETIMVPVEKFPDYNFV 129

Query: 489 GKLLGPKGNTMKQLQEDTLCKMAVLGR 569
           G+LLGP+G T KQL+  T C++ +LGR
Sbjct: 130 GRLLGPRGTTAKQLEVTTGCRITILGR 156


>AF047659-9|AAC04421.1|  254|Caenorhabditis elegans Hypothetical
           protein K07H8.9 protein.
          Length = 254

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 16/36 (44%), Positives = 28/36 (77%)
 Frame = +3

Query: 468 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGS 575
           +P +NF+G+++GP+G T KQL++DT C++ + G  S
Sbjct: 132 YPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNHS 167


>Z73969-19|CAJ43440.1|  548|Caenorhabditis elegans Hypothetical
           protein C12D8.1c protein.
          Length = 548

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = +3

Query: 480 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLXVE 659
           N  G ++G  G+T++QLQE + CKM +L + +     + + LR + DP+   LA  L  E
Sbjct: 101 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 159

Query: 660 I 662
           I
Sbjct: 160 I 160


>Z73969-2|CAA98233.1|  611|Caenorhabditis elegans Hypothetical
           protein C12D8.1b protein.
          Length = 611

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = +3

Query: 480 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLXVE 659
           N  G ++G  G+T++QLQE + CKM +L + +     + + LR + DP+   LA  L  E
Sbjct: 164 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 222

Query: 660 I 662
           I
Sbjct: 223 I 223


>Z73969-1|CAA98232.1|  589|Caenorhabditis elegans Hypothetical
           protein C12D8.1a protein.
          Length = 589

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = +3

Query: 480 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLXVE 659
           N  G ++G  G+T++QLQE + CKM +L + +     + + LR + DP+   LA  L  E
Sbjct: 142 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 200

Query: 660 I 662
           I
Sbjct: 201 I 201


>Z77132-1|CAB00859.1|  278|Caenorhabditis elegans Hypothetical
           protein F54D1.1 protein.
          Length = 278

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/61 (27%), Positives = 35/61 (57%)
 Frame = +3

Query: 474 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLX 653
           K N++G++LGP G + + ++      + + G GS+R++  +E +R+    +  HL + L 
Sbjct: 151 KCNYIGRILGPSGMSARMIENQYDVTLLIRGAGSVRNKAMDERVRK----RNEHLEEPLH 206

Query: 654 V 656
           V
Sbjct: 207 V 207


>U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +3

Query: 486 VGKLLGPKGNTMKQLQEDT 542
           VG ++GPKG T+K++Q+DT
Sbjct: 148 VGLVVGPKGATIKRIQQDT 166


>AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess
           protein 3, isoform a protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +3

Query: 486 VGKLLGPKGNTMKQLQEDT 542
           VG ++GPKG T+K++Q+DT
Sbjct: 148 VGLVVGPKGATIKRIQQDT 166


>AF003139-8|AAK73873.2|  443|Caenorhabditis elegans Muscle excess
           protein 3, isoform b protein.
          Length = 443

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +3

Query: 486 VGKLLGPKGNTMKQLQEDT 542
           VG ++GPKG T+K++Q+DT
Sbjct: 176 VGLVVGPKGATIKRIQQDT 194


>Z37139-3|CAA85492.2|  793|Caenorhabditis elegans Hypothetical
           protein C14B1.6 protein.
          Length = 793

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 580 LIEPLPSTAILHSVSSCNCFIVFPF 506
           L+EP+    I H V  CNC++  PF
Sbjct: 746 LLEPIYRAYINHFVDECNCYLKGPF 770


>AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 1 protein.
          Length = 981

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +3

Query: 201 TTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQAS 377
           TTQ  P+E D+   +  K+ EKA     E+  E  KL      L  +L + + T  + S
Sbjct: 4   TTQQTPKEADKKKADDKKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPS 62


>U80453-5|AAK31443.1|  378|Caenorhabditis elegans Hypothetical
           protein C23H3.3 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 483 FVGKLLGPKGNTMKQLQEDTLCKM 554
           F+GKL+G    T+  L+ +T C++
Sbjct: 111 FIGKLIGTNRRTLNSLENETQCRV 134


>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 165 KNGYNSGDFKRNTTQGKPEELDQNGE-EGIKINEKAG 272
           K+G  SGD K N   G  +  D+NG+  G   N+K+G
Sbjct: 683 KSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSG 719


>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 165 KNGYNSGDFKRNTTQGKPEELDQNGE-EGIKINEKAG 272
           K+G  SGD K N   G  +  D+NG+  G   N+K+G
Sbjct: 683 KSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSG 719


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,207,739
Number of Sequences: 27780
Number of extensions: 256342
Number of successful extensions: 663
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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