Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h10
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    25   0.41 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.6  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 283 GSPEQL*PEPVKSCQFKYFCNSKKNLPPD 369
           GSP+ +  EP  S   K  CN  K + P+
Sbjct: 286 GSPDVIKVEPELSDSEKTLCNGSKGISPE 314


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 238 NYIIQEPVVTPVYSVIIVLSYPVFALVINLYLTFIPCTASESLFRII 98
           ++ I    +  VYS+  + +    +LVIN  L FI C    +L  I+
Sbjct: 59  SFYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMALTLIV 105


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 238 NYIIQEPVVTPVYSVIIVLSYPVFALVINLYLTFIPCTASESLFRII 98
           ++ I    +  VYS+  + +    +LVIN  L FI C    +L  I+
Sbjct: 59  SFYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMALTLIV 105


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -2

Query: 196 VIIVLSYPVFALVINLYLTFIPCTASESLFRIINEIARLYFSLR 65
           V+ +  Y    L +  Y+T+       +   IIN++  LY+ L+
Sbjct: 132 VLQLFLYIFTYLSVTCYVTYAWSPIDHTESNIINDMCSLYYILQ 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,605
Number of Sequences: 336
Number of extensions: 2739
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)