Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h09
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79600-7|CAI79194.1|  173|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z82073-1|CAB04923.1|  444|Caenorhabditis elegans Hypothetical pr...    28   5.4  

>Z79600-7|CAI79194.1|  173|Caenorhabditis elegans Hypothetical
           protein F59C6.12 protein.
          Length = 173

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 448 KYNGNI*CQLFLYILNHNEYLFLNDNR 368
           +YNG I  + + Y ++HN +LFL+D+R
Sbjct: 14  QYNGKI--REYFYYVSHNGFLFLDDSR 38


>Z82073-1|CAB04923.1|  444|Caenorhabditis elegans Hypothetical
           protein W06D12.2 protein.
          Length = 444

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = +1

Query: 22  IQASSVALRMLRQRTATED*ICETPLWLVETRSYAETPDLSSSKRKLRNN*VKNLYAFIK 201
           IQ+    LR  + ++  E  I +TPL  +ET S   +P   +  R +    V  +  F  
Sbjct: 180 IQSLRQKLRRRKVQSLEEGSIDKTPL--METSSTPPSPQNPNGTRPIPLLLVLIVLFFWM 237

Query: 202 LECIVYFKYY 231
           ++C+ YF Y+
Sbjct: 238 IQCVAYFAYF 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,445,650
Number of Sequences: 27780
Number of extensions: 241320
Number of successful extensions: 468
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)