Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10h07
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 140 1e-33
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 122 4e-28
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 4e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 54 1e-07
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 51 1e-06
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 44 2e-04
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 42 4e-04
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 42 4e-04
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 42 5e-04
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025) 30 1.6
SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17) 30 2.1
SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 28 8.4
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.4
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 140 bits (338), Expect = 1e-33
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 4/188 (2%)
Frame = +1
Query: 148 DKNA-RDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDN 324
+KN R+ A A+ N G G+QIWRI+ F+ +++D G FY GDSYIIL T ++
Sbjct: 455 EKNVKREAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKES 514
Query: 325 -RNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 501
+ L +D+H+WIG++STQDE G AA TV LD +QHRE G ES LF SYF++
Sbjct: 515 GEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS 574
Query: 502 PLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGK--RDVRVRQVDPQIASMNKGDVFVLDLD 675
L L+GG SGF HV + R+ +V+G + V +V +S+ DVF+LD
Sbjct: 575 -LTILKGGVDSGFRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKG 632
Query: 676 NDIYVFVG 699
++Y++VG
Sbjct: 633 LNLYLWVG 640
Score = 77.4 bits (182), Expect = 1e-14
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Frame = +1
Query: 253 VAQKDIGKFYKGDSYIILRTTSD-NRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKF 429
V + D GKFY GDSYIIL T D + L +D+H+WIG++STQDE G AA TV LD
Sbjct: 880 VLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIYP 939
Query: 430 GGAAVQH----RETMGHESALFLSYFQTPLNYLEGGNPSGFNHV---VTNAGAQKRMFQV 588
V+ R+++ + L +T + G+ F V V++A Q ++ ++
Sbjct: 940 KSVKVEEVPFVRKSLNSDDVFILDKGKT---IYQKGDYDDFEPVLLRVSDASGQMKLTEM 996
Query: 589 KGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVG 699
K K R+ + D ++ DVF+ D N ++V+ G
Sbjct: 997 K-KGKGRITRND-----FDEKDVFLFDTGNVLFVYSG 1027
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 122 bits (293), Expect = 4e-28
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Frame = +1
Query: 133 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 312
++ ++ + + A+ A+ N G G+QIWRI F+ ++ G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555
Query: 313 TSDNRNN--LSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFL 486
+ + L +D+H+WIGR STQDE G AA TV LD VQHRE M HES +F
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615
Query: 487 SYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRD 603
+YF++ + YL+GG +GFN V + R+ +V G ++
Sbjct: 616 TYFKS-ITYLKGGAETGFNQVKPKE-YKPRILKVSGDKN 652
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 199 GRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQ 378
GR+ V +R+ + + G F+ GDSY+++ T R I++W G +S
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214
Query: 379 DESGAAAILTVGLD-DKFGGAAVQ 447
E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 148 DKNAR-DKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 312
+KN + + A+ PA+ G+ GVQ+WRI F+ ++D G FY GDSYI+L T
Sbjct: 347 EKNVKKESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/132 (28%), Positives = 60/132 (45%)
Frame = +1
Query: 304 LRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 483
L+T D + L W I+YWIG+E++ RE G ES F
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEAS-------------------------REEQGDESEEF 294
Query: 484 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFV 663
F + Y+EGG SGF + V + R+F++ + V + V P ++S++ F+
Sbjct: 295 HELFDNDIAYIEGGTASGF-YSVEDQIYITRLFRLLKDKRVLLEPVLPDVSSLDPTFTFI 353
Query: 664 LDLDNDIYVFVG 699
LD IY++ G
Sbjct: 354 LDAGLKIYIWSG 365
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 48.4 bits (110), Expect = 6e-06
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 15/190 (7%)
Frame = +1
Query: 175 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT----TSDNRNNL-- 336
V AF G+ G++IWRI+ + + K G FY GDSYI L S N+ ++
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 337 ---SWDIHYWIGRESTQDESGAAAILTVGL-DDKFGGAAVQHRETMGHESALFLSYFQTP 504
+I+ W G + ++ E + + D++ GG A H + L +F
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESKFFDAL 122
Query: 505 LNYLEGGNPSGFNHVV---TNAGAQKRMFQVKGKRDVRVRQVDP-QIASMNKGDVFVLDL 672
+ E G + A + M G+ ++R + P + ++++ D F+LD
Sbjct: 123 GSRGEIAEDLGTTRSLRKPARAPSLSTMSDASGELEMREIEAKPLKKSNLDTNDCFILDC 182
Query: 673 -DNDIYVFVG 699
+ ++V+VG
Sbjct: 183 GSSGVFVWVG 192
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 277 FYKGDSYIILRTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDK-FGGAAVQHR 453
FY GDSY+IL D N +H G+ ++ DE AA + +DD+ FGG A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 454 ETMGHESALF 483
+ E F
Sbjct: 737 QVCCREKVQF 746
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +1
Query: 193 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDNRNNLSWDI 348
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273
Query: 349 --------HYWIGRESTQDESGAAAILTVGLDDKFG 432
+W G + T +E GAAA++ V LD++ G
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 309
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +1
Query: 193 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDNRNNLSWDI 348
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828
Query: 349 --------HYWIGRESTQDESGAAAILTVGLDDKFG 432
+W G + T +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 592 GKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVG 699
G+R+++ R ++P S N GD +VL ++++ +VG
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVG 1492
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 343 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 501
++H+W+G E + +E AA V L K G VQ+RE G+E+ F FQ+
Sbjct: 22 NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 352 YWIGRESTQDESGAAAILTVGLDDKFG-GAAVQHRETMGHESALFLSY 492
+W G +ST +E GAAA++TV +D + G +H T+ + F Y
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIY 244
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 352 YWIGRESTQDESGAAAILTVGLDDKFG 432
+W G +ST +E GAAA++TV +D + G
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKG 63
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 445 QHRETMGHESALFLSYFQTPLNYLEGGNPSGFN---HVVTNAGAQKRMFQVKGKRDVRVR 615
Q R E FL F+ L LEGG +GF T KRMF VKG D+ +
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGFRAGCEEDTYDHEGKRMFHVKGTTDLNAK 97
Query: 616 QVDPQI 633
+ ++
Sbjct: 98 AIQKRL 103
>SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025)
Length = 1266
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 440 RSSTERPWVTKALCSYHISRHP*TIWREGIRPVLTTSSRTREPRNECSRSRGSEMSALDK 619
R + +P+V++ +P T+ GIRP+L +S+ PR + R+ G+ S D
Sbjct: 295 RPTENQPYVSRGPLEIQ-PHNPTTMQNAGIRPMLASSAGIALPRKQQKRNTGAPDSCGDA 353
Query: 620 S 622
S
Sbjct: 354 S 354
>SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17)
Length = 488
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 568 QKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDI 684
+KR + VKG DVR R P S+ D V+DL NDI
Sbjct: 88 RKRRYHVKGSNDVRKRSGSPS-GSITTDDESVVDL-NDI 124
>SB_55017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 367 PDRSSSGCPMTDCCDCPRSSVK*CMNLLCR--IFLCPSEQRVL 245
PD+ ++ P T C DCP M ++ R IF C E +VL
Sbjct: 57 PDKRTNTLPFTHCYDCPLIITSVYMGIMGRRGIFQCMLEVQVL 99
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +1
Query: 220 IWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRN--NLSWDIHY--WIGR 366
IWR+Q Q +IG + ++ SD R +LSW H+ W+ R
Sbjct: 160 IWRLQRARNSDSCQSEIGVNFNSRPQLVTNEKSDTRTCLSLSWLSHFSRWLPR 212
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 230 YRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTIATICHGTSTTGSV 364
Y N L++ + S KE++ F +P A +C G +T GSV
Sbjct: 150 YAEHNADTLVKYSLSPSAKELYFKF-SKPNEDAPLCQGAATAGSV 193
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 161 VTKLRSTRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEI 292
+T + RLL +A +P+ K R++N+Y ++ +N K I
Sbjct: 129 ITSTKEERLLVSTASKPIVKLSYNRSNNKYSYTGQSDDNLLKNI 172
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 148 DKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDI-GKFYKGDSYIILRTTSDN 324
+KN KA + F G + G + I +PV +D Y+ ++ II+ TT +
Sbjct: 694 NKNVTGKAGFYEEFE--GESRGTEKQYIAAQGCLPVTVEDFWAMVYQENTRIIVMTTKEV 751
Query: 325 RNNLSWDIHYWIGRESTQD 381
+ YW E+T+D
Sbjct: 752 ERGRNKCTRYWPDAETTKD 770
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -1
Query: 663 NEDVAFVHRSYLRIDLSNADISLPLDLEHSFLGSRVRDDVVKTGRIPSLQIVQGCLEI** 484
+EDVA + + + + S+ D DL +SF + + + V L+
Sbjct: 522 DEDVA-IGAAMVTVTASDKDNGNNADLRYSFTSGNT-NHAFTLDAVTGVVTVSRSLDF-- 577
Query: 483 EQSAFVTHGLSVLDRGAPEL 424
EQ + GLSV DRG+P L
Sbjct: 578 EQRSSYALGLSVTDRGSPPL 597
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,397,260
Number of Sequences: 59808
Number of extensions: 499094
Number of successful extensions: 1405
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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