Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h06
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.18 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            27   0.54 
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   6.7  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   6.7  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   6.7  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 171 ELRKGFQEFSEETEP*LSLWL*DEEAKNRSGFYDTSITKEHKSSATSKMWRLRSPASET 347
           EL K  QE +E  E  L + + DE  KN   FY+    K+H  S  + +W+  +  ++T
Sbjct: 429 ELEKKIQEHTESFEQ-LRVQI-DEHNKN---FYELKKKKDHYQSLRNDIWKKETAVTQT 482


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 219 LSLWL*DEEAKNRSGFYDTSITKEHKSSA 305
           L LWL  EE  +R   YD  ++  HK  A
Sbjct: 881 LCLWLVAEEELDRDKLYDAFVSYSHKDEA 909


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 435 NLPSQLFSGNSELDADGKFAS 373
           N P Q F   +E+D +G  AS
Sbjct: 107 NFPGQQFESYAEIDKNGNIAS 127


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 445 KLDFHHYLPMFFDGLAEGTYPYSF 516
           +L +  ++  F++GL  G  P+SF
Sbjct: 815 RLHWVEFMSKFYEGLGYGFQPFSF 838


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = -3

Query: 477 EHRQVVMEVQFLYGNLPSQLFSGNS--------ELDADGKFASLITFSEHRRSRRQGIED 322
           EHR+ + + + L+  L +Q   G S        EL  + +    +  S+ R+ +RQ +ED
Sbjct: 130 EHREELRKEKELFNALLAQTLGGTSGARLESQQELQREQELLRRME-SQQRQEQRQQLED 188

Query: 321 ATFWRW 304
               RW
Sbjct: 189 QQRQRW 194


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +3

Query: 360 KMLSKRRISRLHRVHYYRKTIGLEGSHRETG 452
           + +S    + L R+  + + +GLE +H++TG
Sbjct: 668 EQVSALATANLERIERWLRGVGLELAHQKTG 698


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,365
Number of Sequences: 2352
Number of extensions: 15324
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)