Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h06
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28943-6|AAA68360.1|  324|Caenorhabditis elegans Hypothetical pr...    38   0.009
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr...    32   0.32 
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr...    32   0.32 
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    32   0.43 
AF067209-1|AAC16982.2|  553|Caenorhabditis elegans Warthog (hedg...    30   1.7  
Z36719-3|CAA85314.1|  135|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z93393-5|CAB07690.1|  611|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine rece...    29   4.0  
Z93377-2|CAB07575.2|  326|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>U28943-6|AAA68360.1|  324|Caenorhabditis elegans Hypothetical
           protein E04F6.2 protein.
          Length = 324

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
 Frame = +1

Query: 250 RIVPAFTIQALQKNTKVVPPPKC------GVFDPLPPRPTMFRKCYQRGEFPVCIEFT-- 405
           R VP F+ Q+ Q+NT VVP P         V   +    + FR  + RG+  V I  +  
Sbjct: 93  RKVPPFSYQSYQQNTSVVPLPMIAPSRTRSVDSNVSDDCSQFRALFSRGDLHVRIIHSGG 152

Query: 406 --ITGKQLAW-KVP--IEKLDFHHYLPMFFDGLAEGTYPYSFIVERGIHDLV 546
                ++L W K P  ++     + L  F  G++   +PY F+ E GI DL+
Sbjct: 153 AGEKPRELRWAKDPSQMKNETICNLLAKFSTGMSLLDHPYRFVAETGITDLL 204


>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
           protein F43G6.1b protein.
          Length = 1069

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 270 DTSITKEHKSSATSKMWRLRSPASETDDVQKMLSKRRISRLHRVHYY 410
           D  +TK  K  A  K+ RL S +S  DD++KM  K ++       YY
Sbjct: 707 DNILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKLENETSEEYY 753


>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
           protein F43G6.1a protein.
          Length = 1105

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 270 DTSITKEHKSSATSKMWRLRSPASETDDVQKMLSKRRISRLHRVHYY 410
           D  +TK  K  A  K+ RL S +S  DD++KM  K ++       YY
Sbjct: 743 DNILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKLENETSEEYY 789


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +1

Query: 379  EFPVCIEFTITGKQLAWKVPIEKLDFHHYL-PMFFDGLAEGTYPYSFIVERGIHDLVTKG 555
            E  + I  TI       +V +EKL+ H +L P   +GL EG   +   +  GI   V KG
Sbjct: 2061 EKKIIINPTIPPTPRGERVLVEKLEIHEHLRPDDDEGLLEGNEDFGVRITTGIRKRVIKG 2120

Query: 556  S 558
            S
Sbjct: 2121 S 2121


>AF067209-1|AAC16982.2|  553|Caenorhabditis elegans Warthog
           (hedgehog-like family)protein 9 protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +1

Query: 154 PPCVPQSCGKDFRNSLKKPSPNYPYGYKTRKPRIVPAFTIQALQKNTKVVPPPKCGVFDP 333
           P   P+   + +   +  P P   +          P   +Q ++  T+  PPP   VF P
Sbjct: 300 PRAPPRRVHQPYTRRILTPKPRIVHTTTVMPTTHAPPVQVQ-VEPVTQPTPPPNPFVFAP 358

Query: 334 LPPRP 348
           LPP P
Sbjct: 359 LPPFP 363


>Z36719-3|CAA85314.1|  135|Caenorhabditis elegans Hypothetical
           protein C06C3.7 protein.
          Length = 135

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 288 EHKSSATSKMWRLRSPASETDDVQKMLSKRRISRLHRVHY 407
           +H ++   K+  LR+P  E   ++K+  + RI R   VHY
Sbjct: 64  QHMTAKEVKIPLLRTPDEEARKIEKLRREARIKRSKEVHY 103


>Z93393-5|CAB07690.1|  611|Caenorhabditis elegans Hypothetical
           protein Y48E1B.4 protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 244 KPRIVPAFTIQALQKNTKVVPPPKCGVFDPL-PPR 345
           K R +P + +Q   +  + +PP +CG+ +PL PPR
Sbjct: 45  KTRWIPQYNLQNFWR--RKIPPLQCGLIEPLIPPR 77


>U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 3 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 38  LFYYLCQHFRSILSDYLLE-TFLHCVSCFFDL 130
           LFYYL   FRS L D  ++   L+ V+ F DL
Sbjct: 270 LFYYLIPQFRSALKDVFMKMKILNAVASFPDL 301


>Z93377-2|CAB07575.2|  326|Caenorhabditis elegans Hypothetical
           protein F13A7.3 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 24  TNLPSYFITCVNILDRYYQI 83
           T + SYF+TCV+I+  Y QI
Sbjct: 177 TVMTSYFVTCVSIIIMYSQI 196


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 205 KPSPNYPYGYKTRKPRIVPAFTIQALQKNTKVVPPPKCGVFDPLPPRPTMFRKCYQRGEF 384
           +P P +P+  +   P   P + +   + +   VP P+ G  +  PP P   RK    G  
Sbjct: 80  QPPPAHPHHLQHPHPYAYPGYPVPGQEGHQ--VPAPQHGDHEASPPPPPPPRKSRAGGSS 137

Query: 385 P 387
           P
Sbjct: 138 P 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,114,470
Number of Sequences: 27780
Number of extensions: 366856
Number of successful extensions: 1171
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)