Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h06
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.50 
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   3.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.1  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   8.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.1  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   8.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   8.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.1  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 328 DPLPPRPTMFRKCYQRGEFPVCIEFTITGKQLA 426
           + L P P+MF KC   G     I + + GK+L+
Sbjct: 403 ETLQPGPSMFLKCVASGNPTPEITWELDGKRLS 435



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 264 FYDTSITKEHKSSATSKMWRLRSPASETDDVQKMLS 371
           +YDT + KE+     S + +   P+   D V K+LS
Sbjct: 104 YYDTDVNKEYAIRGNSAILKCVVPSFVADFV-KVLS 138


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 54  VNILDRYYQIICLRRFYTVYHVFLIYY 134
           VNI+D+Y +II    F     ++ I+Y
Sbjct: 461 VNIIDKYSRIIFPVSFMLFNAIYWIFY 487


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 370 QRGEFPVCIEFTITGKQLAWKVPIEKLD 453
           Q  +  VC   T T  Q+A K PIE  D
Sbjct: 570 QSMDIDVCDNQTYTSLQMAMKNPIEFTD 597


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 393 HRVHYYRKTIGLEGSH 440
           HRV Y+R+ IG+   H
Sbjct: 194 HRVAYWREDIGINLHH 209


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 603 KCLGDEAPCSHLSR 644
           KC+ DE PC++  R
Sbjct: 45  KCMLDEGPCTNEGR 58


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 302 CHLQNVASSIPCLRDRRCSENVIKEANF 385
           C  +NV   I CLR R     V   ANF
Sbjct: 261 CPTRNVKEMIRCLRYRPARAIVETLANF 288


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 302 CHLQNVASSIPCLRDRRCSENVIKEANF 385
           C  +NV   I CLR R     V   ANF
Sbjct: 132 CPTRNVKEMIRCLRYRPARAIVETLANF 159


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 603 KCLGDEAPCSHLSR 644
           KC+ DE PC++  R
Sbjct: 45  KCMLDEGPCTNEGR 58


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 302 CHLQNVASSIPCLRDRRCSENVIKEANF 385
           C  +NV   I CLR R     V   ANF
Sbjct: 261 CPTRNVKEMIRCLRYRPARAIVETLANF 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,864
Number of Sequences: 438
Number of extensions: 4966
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)