Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h03
         (795 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19420.2 68417.m02858 pectinacetylesterase family protein con...    28   8.2  
At4g19420.1 68417.m02857 pectinacetylesterase family protein con...    28   8.2  

>At4g19420.2 68417.m02858 pectinacetylesterase family protein
           contains Pfam profile: PF03283 pectinacetylesterase
          Length = 309

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 340 IDPGYDSSSTSAALAIRADGCHGWWRSCRIGCGSC 444
           ++  YDS      LA RA   +G W+SC++   +C
Sbjct: 263 LNAAYDSWQIKNILAPRAADPYGKWQSCQLDIKNC 297


>At4g19420.1 68417.m02857 pectinacetylesterase family protein
           contains Pfam profile: PF03283 pectinacetylesterase
          Length = 397

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 340 IDPGYDSSSTSAALAIRADGCHGWWRSCRIGCGSC 444
           ++  YDS      LA RA   +G W+SC++   +C
Sbjct: 263 LNAAYDSWQIKNILAPRAADPYGKWQSCQLDIKNC 297


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,718,572
Number of Sequences: 28952
Number of extensions: 248445
Number of successful extensions: 564
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)