Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h02
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL137724-1|CAB70894.1|  439|Homo sapiens hypothetical protein pr...    31   4.0  
AC078834-1|AAS01989.1|  439|Homo sapiens unknown protein.              31   4.0  
AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B prot...    30   9.3  
AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal ...    30   9.3  
AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal ...    30   9.3  
AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein.     30   9.3  

>AL137724-1|CAB70894.1|  439|Homo sapiens hypothetical protein
           protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 606 QHSNQRPPQHRPHEHSRPVLTPP 538
           QH  Q PPQH+ H H   +  PP
Sbjct: 68  QHPPQHPPQHQHHHHHHHLSVPP 90


>AC078834-1|AAS01989.1|  439|Homo sapiens unknown protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 606 QHSNQRPPQHRPHEHSRPVLTPP 538
           QH  Q PPQH+ H H   +  PP
Sbjct: 68  QHPPQHPPQHQHHHHHHHLSVPP 90


>AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B protein.
          Length = 1960

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 272  SRCMHTAEGGACGRVRQALCTTHGARPAATSDVTSTCSNITRSRFGPMCDK 120
            SRC     GGA   +R  LC     RP A+S +   C  +T    GP C +
Sbjct: 1879 SRCYAGLSGGAVAFLRSTLCAQPWGRPCASSCL--QCPWLTEE--GPACSR 1925


>AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal
            calmodulin and titin-interacting RhoGEF protein.
          Length = 2582

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 272  SRCMHTAEGGACGRVRQALCTTHGARPAATSDVTSTCSNITRSRFGPMCDK 120
            SRC     GGA   +R  LC     RP A+S +   C  +T    GP C +
Sbjct: 2501 SRCYAGLSGGAVAFLRSTLCAQPWGRPCASSCL--QCPWLTEE--GPACSR 2547


>AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal
            calmodulin and titin-interacting RhoGEF protein.
          Length = 2582

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 272  SRCMHTAEGGACGRVRQALCTTHGARPAATSDVTSTCSNITRSRFGPMCDK 120
            SRC     GGA   +R  LC     RP A+S +   C  +T    GP C +
Sbjct: 2501 SRCYAGLSGGAVAFLRSTLCAQPWGRPCASSCL--QCPWLTEE--GPACSR 2547


>AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein.
          Length = 2584

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 272  SRCMHTAEGGACGRVRQALCTTHGARPAATSDVTSTCSNITRSRFGPMCDK 120
            SRC     GGA   +R  LC     RP A+S +   C  +T    GP C +
Sbjct: 2503 SRCYAGLSGGAVAFLRSTLCAQPWGRPCASSCL--QCPWLTEE--GPACSR 2549


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,160,201
Number of Sequences: 237096
Number of extensions: 1392982
Number of successful extensions: 8158
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8151
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)