Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h01
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 182 LARRRSTLLVDLLLRAPSDWVVS-EWP 259
           + +R+  ++ D+L R PSD   S E+P
Sbjct: 18  VGKRKGNVVADILSRYPSDGEASYEYP 44


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 195  GLHCLSISCSVHQVIGWYQNGQVHSQLV 278
            GL+ L I+ ++  V+G  Q  Q+H Q +
Sbjct: 1331 GLNFLIITQAMFLVVGQLQASQIHWQKI 1358


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 342 SVHWTSALQAWPF*ELKI 395
           S HW + ++ W F E+ +
Sbjct: 136 SKHWVTIMKEWSFMEMSM 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,274
Number of Sequences: 336
Number of extensions: 3714
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)