Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g24
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689...    28   7.9  
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121...    28   7.9  
01_01_0018 + 139150-140415                                             28   7.9  

>10_08_0607 +
           19168164-19168358,19168594-19168716,19168791-19168946,
           19169129-19169314,19169467-19169583,19169721-19169774,
           19169854-19169925,19170430-19170535,19170658-19170754,
           19171090-19171184,19172318-19172420,19172699-19172886,
           19174928-19175183,19177187-19177325
          Length = 628

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = +2

Query: 101 IRPKIFFFEIYNGSGFSQYRPTALYSWVHGSLSRVQVSDRRYVWLDNTQDPSRSERAA 274
           + P +F   +Y G       P+   S    S  R Q++    +WL   Q+P+ S R +
Sbjct: 383 VYPDVFMTNLYYGGTRIAGDPSNCSSPAAVSTVRKQIASHISLWLSQCQEPTSSRRTS 440


>02_01_0177 +
           1214226-1214294,1214707-1214794,1216095-1216308,
           1216413-1216738,1216860-1217013,1217377-1217438,
           1218078-1218133,1219456-1221279,1221775-1222698,
           1222855-1222866
          Length = 1242

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
 Frame = +3

Query: 336 QNEIDIVNARF---RNGDPVYKHPMIPGYEGFSGHVPYGFQ-RFGESSKKLTN---SALC 494
           + EI+I++  F    NG PV  +PM   ++   G    G   + G  SK L     +AL 
Sbjct: 149 EEEINILDENFGAKSNGVPVI-YPMNGHFQNGHGVASNGLDGKAGFVSKSLEGRAVAALN 207

Query: 495 DFSSNYRRRQSTEWAPVNVVKPDPPLSI 578
            F  N +      W    +  PDPP  +
Sbjct: 208 KFGQNAKMTSDPMWMKKALPPPDPPAMV 235


>01_01_0018 + 139150-140415
          Length = 421

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
 Frame = +1

Query: 142 WI*SVSPNRIIFLGTRV---IVPSTSIGSAIRMARQHTRSFSIRACS-IQRGWCYPIERP 309
           W  + S NR I L T +   I  + S    + +   H        CS +    C  +++P
Sbjct: 86  WASAQSHNRCIILDTDIAEAIASTESYDFLVDILHNHREKHKSTPCSTLTTKRCRLVDQP 145

Query: 310 MTSRSTVQHRTR*TS*THVSVMAIPFT 390
            TSR   QH+    + T+    AIP T
Sbjct: 146 STSRPPYQHQLPLFAPTYTP--AIPIT 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,808,536
Number of Sequences: 37544
Number of extensions: 454132
Number of successful extensions: 1153
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)