Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10g24
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC129999-1|AAI30000.1| 216|Homo sapiens LOC730112 protein protein. 64 4e-10
BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17 p... 63 1e-09
BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17 p... 63 1e-09
AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens ... 63 1e-09
U50330-1|AAA93462.1| 986|Homo sapiens procollagen C-proteinase ... 32 2.2
BC142953-1|AAI42954.1| 986|Homo sapiens bone morphogenetic prot... 32 2.2
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 30 8.8
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 30 8.8
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 30 8.8
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 30 8.8
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 30 8.8
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 30 8.8
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 30 8.8
>BC129999-1|AAI30000.1| 216|Homo sapiens LOC730112 protein protein.
Length = 216
Score = 64.1 bits (149), Expect = 4e-10
Identities = 42/123 (34%), Positives = 58/123 (47%)
Frame = +3
Query: 165 PHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDFQIYRPAQNE 344
PHYIPGYTGHCP ++ +G TYG T ++L P + RT I P E
Sbjct: 16 PHYIPGYTGHCPLLRFSVGQTYGQVTGQLLRGPPGLAWPPV---HRTLLP-PIRPPRSPE 71
Query: 345 IDIVNARFRNGDPVYKHPMIPGYEGFSGHVPYGFQRFGESSKKLTNSALCDFSSNYRRRQ 524
+ + R G MIPGY GF VP F ++ ++ AL DF+ + ++
Sbjct: 72 VPRESLPVRRGQERLSSSMIPGYTGF---VPRAQFIFAKNCSQVWAEALSDFTHLHEKQG 128
Query: 525 STE 533
S E
Sbjct: 129 SEE 131
>BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
+PHY+PGY G P+ +Y++G+TYG TT ++L DPSVQ S VLS + F
Sbjct: 13 EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64
>BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
+PHY+PGY G P+ +Y++G+TYG TT ++L DPSVQ S VLS + F
Sbjct: 13 EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64
>AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ40100 fis, clone TESTI2004675. ).
Length = 271
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
+PHY+PGY G P+ +Y++G+TYG TT ++L DPSVQ S VLS + F
Sbjct: 13 EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64
>U50330-1|AAA93462.1| 986|Homo sapiens procollagen C-proteinase
protein.
Length = 986
Score = 31.9 bits (69), Expect = 2.2
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = -3
Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 235
D CK D + VRS + S L G+ GS +P + + N R + + +S
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697
Query: 234 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 154
+H + D C++DN C Q+ N G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCVNTFGSY 725
>BC142953-1|AAI42954.1| 986|Homo sapiens bone morphogenetic protein
1 protein.
Length = 986
Score = 31.9 bits (69), Expect = 2.2
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = -3
Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 235
D CK D + VRS + S L G+ GS +P + + N R + + +S
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697
Query: 234 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 154
+H + D C++DN C Q+ N G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCINTFGSY 725
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -3
Query: 360 RSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCT 181
RSR SRS + RS S R R S + +RS R S YRR + + P +
Sbjct: 45 RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRH--SHSHSPMS 102
Query: 180 QEYNAVGRY*LNPEP 136
VG NP+P
Sbjct: 103 TRRRHVGNR-ANPDP 116
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -3
Query: 360 RSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCT 181
RSR SRS + RS S R R S + +RS R S YRR + + P +
Sbjct: 45 RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRH--SHSHSPMS 102
Query: 180 QEYNAVGRY*LNPEP 136
VG NP+P
Sbjct: 103 TRRRHVGNR-ANPDP 116
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -3
Query: 360 RSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCT 181
RSR SRS + RS S R R S + +RS R S YRR + + P +
Sbjct: 45 RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRH--SHSHSPMS 102
Query: 180 QEYNAVGRY*LNPEP 136
VG NP+P
Sbjct: 103 TRRRHVGNR-ANPDP 116
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -3
Query: 360 RSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCT 181
RSR SRS + RS S R R S + +RS R S YRR + + P +
Sbjct: 45 RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRH--SHSHSPMS 102
Query: 180 QEYNAVGRY*LNPEP 136
VG NP+P
Sbjct: 103 TRRRHVGNR-ANPDP 116
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -3
Query: 360 RSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCT 181
RSR SRS + RS S R R S + +RS R S YRR + + P +
Sbjct: 45 RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRH--SHSHSPMS 102
Query: 180 QEYNAVGRY*LNPEP 136
VG NP+P
Sbjct: 103 TRRRHVGNR-ANPDP 116
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -3
Query: 360 RSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCT 181
RSR SRS + RS S R R S + +RS R S YRR + + P +
Sbjct: 45 RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRH--SHSHSPMS 102
Query: 180 QEYNAVGRY*LNPEP 136
VG NP+P
Sbjct: 103 TRRRHVGNR-ANPDP 116
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = -3
Query: 360 RSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCT 181
RSR SRS + RS S R R S + +RS R S YRR + + P +
Sbjct: 33 RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRH--SHSHSPMS 90
Query: 180 QEYNAVGRY*LNPEP 136
VG NP+P
Sbjct: 91 TRRRHVGNR-ANPDP 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,072,868
Number of Sequences: 237096
Number of extensions: 2314739
Number of successful extensions: 5571
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5562
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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