Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g24
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-1|AAG00009.2|  118|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B...    28   7.1  
AY389809-1|AAR28681.1|  909|Caenorhabditis elegans zinc finger t...    28   7.1  
Z78015-5|CAB01432.2|  258|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>U41538-1|AAG00009.2|  118|Caenorhabditis elegans Hypothetical
           protein R04E5.7 protein.
          Length = 118

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 255 LDPSVQHSERLVLSDRTADDFQIYRPAQNEIDIVNAR 365
           ++  VQ++ERL L  +T   F +   AQNE D  N +
Sbjct: 73  INVQVQNNERLDLDPKTCSQFSLPEVAQNEGDTFNVQ 109


>Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical
           protein K06G5.1b protein.
          Length = 489

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +2

Query: 122 FEIYNGSGFSQYRPTALYSWVHGSLSRVQVSDRRYVWLDNTQDPSRSERAAFREAGA 292
           F +YNG           ++      ++   S  +Y++++ TQD + S  A +   GA
Sbjct: 87  FTLYNGKVADNSTKITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGA 143


>Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical
           protein K06G5.1a protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +2

Query: 122 FEIYNGSGFSQYRPTALYSWVHGSLSRVQVSDRRYVWLDNTQDPSRSERAAFREAGA 292
           F +YNG           ++      ++   S  +Y++++ TQD + S  A +   GA
Sbjct: 87  FTLYNGKVADNSTKITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGA 143


>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
           protein T05A10.1a protein.
          Length = 2066

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 446 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 497


>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
           protein T05A10.1f protein.
          Length = 2048

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565


>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
           protein T05A10.1e protein.
          Length = 2101

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565


>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
           protein T05A10.1d protein.
          Length = 2134

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565


>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
           protein T05A10.1g protein.
          Length = 1888

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565


>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
           protein T05A10.1i protein.
          Length = 1927

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565


>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
           protein T05A10.1j protein.
          Length = 1509

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565


>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
           protein T05A10.1c protein.
          Length = 1692

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 72  LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 123


>Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical
           protein T05A10.1b protein.
          Length = 725

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 537 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 588


>AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B
           protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 537 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 588


>AY389809-1|AAR28681.1|  909|Caenorhabditis elegans zinc finger
           transcription factorSMA-9 protein.
          Length = 909

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 99  LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 254
           L G K+F    T    L+   Q H  P YT  C   K    +  G   H+++
Sbjct: 446 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 497


>Z78015-5|CAB01432.2|  258|Caenorhabditis elegans Hypothetical
           protein R02D5.3 protein.
          Length = 258

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +1

Query: 169 IIFLGTRVIVPSTSIGSAIRMARQHTRSFS 258
           +IFL TR  V  +SIGSAIR+     RS S
Sbjct: 145 LIFLSTRDQVVYSSIGSAIRIDDSIIRSIS 174


>Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G2.8 protein.
          Length = 197

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 20/58 (34%), Positives = 23/58 (39%)
 Frame = -3

Query: 387 KRDRHYGNVRSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRS 214
           KR R     RSR  SRS    RSGS R   R +    +     R  S    +   RRS
Sbjct: 124 KRSRSRSRSRSRSRSRSYSRSRSGSRRSSRRRSRRRSSLKARGRRASTAKKTPAKRRS 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,991,744
Number of Sequences: 27780
Number of extensions: 392821
Number of successful extensions: 1189
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)