Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g22
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.8  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       25   2.4  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       24   5.5  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       24   5.5  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    24   5.5  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +1

Query: 334 GHPALIDPGRSSGEPLNEGHYTID-FAPAPGDNEE 435
           G P L+ P   SGEP  +    +D   P  GD  E
Sbjct: 634 GEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGE 668


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 560 AVKRPHLKSMKQTISRQSMPLKHSTRKDSLHPFLGLE 670
           A KRPH+K  K    + + P   S R  +    LG E
Sbjct: 112 AAKRPHMKKKKVLFHQDNAPCHKSLRTMAKIDELGFE 148


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +2

Query: 560 AVKRPHLKSMKQTISRQSMPLKHSTRKDSLHPFLGLE 670
           A KRPHLK  K    + + P   S +       LG E
Sbjct: 112 ATKRPHLKKKKFLFHQDNAPCHKSVKTMEKIQELGYE 148


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +2

Query: 560 AVKRPHLKSMKQTISRQSMPLKHSTRKDSLHPFLGLE 670
           A KRPHLK  K    + + P   S +       LG E
Sbjct: 112 ATKRPHLKKKKFLFHQDNAPCHKSVKTMEKIQELGYE 148


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 133 RITSRFVRLWRKVQTVSDYLTFPLAFLCCQGVGMP 237
           RIT R  +L R    ++   T P+  +C + +GMP
Sbjct: 54  RITPRLAKLQRGDIIITKSPTKPVQHVCKRIIGMP 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,473
Number of Sequences: 2352
Number of extensions: 16797
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)