Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10g19
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 39 0.004
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 34 0.091
SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12) 33 0.28
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 31 0.85
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 31 1.1
SB_8758| Best HMM Match : E-MAP-115 (HMM E-Value=0.25) 30 1.5
SB_23180| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51) 30 2.0
SB_41007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 2.6
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_2282| Best HMM Match : PHZA_PHZB (HMM E-Value=4.4) 29 2.6
SB_47535| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_51841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 28 6.0
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 6.0
SB_39171| Best HMM Match : EzrA (HMM E-Value=0.16) 28 6.0
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_16527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_8756| Best HMM Match : DUF1168 (HMM E-Value=1) 28 6.0
SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 7.9
SB_53789| Best HMM Match : ResIII (HMM E-Value=0.044) 28 7.9
SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_1074| Best HMM Match : ScdA_N (HMM E-Value=2.4) 28 7.9
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Frame = +1
Query: 445 DVAVKENQLPERCSGLV----KDIREKFGKDSNEDEDKVE-SVDETYENPYIVDKSQLEE 609
+V E++L ++C LV K+++EK+ + NE +KVE ++ + YE + +S+LEE
Sbjct: 545 EVKFIEDELKKQCKALVEKKAKELKEKYQGELNEKVNKVERTLRKQYEEDIVKGRSELEE 604
Query: 610 IERKLE 627
R L+
Sbjct: 605 TNRTLK 610
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 448 VAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLE 627
V + L ERC V ++EK D + +DK + ++ E + ++ ++ERKL+
Sbjct: 1586 VETLQELLRERCEE-VDVLKEKIS-DKRQVQDKNPASNDKAEEEASTKEERVNDLERKLD 1643
Query: 628 PLMSKNKR 651
L N R
Sbjct: 1644 ELQQSNTR 1651
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 397 KMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD----- 561
++ E KS+ ++ H+V + L + + + K R+ F KD+ ++E +D
Sbjct: 2356 RIENSESKSRFTQINHEVLSLQKDLANKTAQITKFQRDTFDKDNRLTTLEIEKIDIEKKL 2415
Query: 562 ETYENPYIVDKSQLEEIERKL 624
E+ ++ Y +K++L E E L
Sbjct: 2416 ESLKDEYSGEKTKLVEAEGNL 2436
>SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12)
Length = 495
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +1
Query: 397 KMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 576
K+M EE+ K+A L + EN DI+ K+G+ S E E+ V+ +DE
Sbjct: 65 KIMMKEEELKMAAELGKKMLAEND----------DIKMKYGELSREHEEVVKELDEEITR 114
Query: 577 PYIVDKSQL----EEIERKLEPLMSKNKRNSVA 663
D++ L + ++ K E M KNK +A
Sbjct: 115 -VTTDRNNLRTSMKTLQAKYEQAMQKNKEYEIA 146
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/97 (21%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +1
Query: 370 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKV 549
K + ++ +M D + K ++ L + K ++ E+ ++D+ EKF K+ D+V
Sbjct: 356 KAGLPKEVLSLMNDAREEKRSENLSKMEKKLSETQEK----LQDMEEKFSKEKRAWADEV 411
Query: 550 ESVDETYENPYIV---DKSQLEEIERKLEPLMSKNKR 651
ES++ ++ ++ +S+L E + L +N++
Sbjct: 412 ESLETDVKSLQLISDESESKLREAQSSLREYREENRK 448
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +1
Query: 508 EKFGKDSNEDEDKVESVDETYENPYIVDK-SQLEEIERKLEP--LMSKNKRNSVAS 666
E+ G+D +++E++ E DE+ E+ Y+ ++ S+ + K+ P L SK+ S AS
Sbjct: 418 EENGEDDDDEEEEEEDSDESEESEYLEEQPSRRSTVRPKVRPTALPSKSGSRSAAS 473
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/92 (21%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Frame = +1
Query: 403 MTDEEKSKIAKLLHDVAVKEN---QLPERCSGLVKDI---REKFGKDSNEDEDKVESVDE 564
M DE+++K +L D+ + N +L E+ L + +E++ + + E+++ +
Sbjct: 436 MLDEKQAKYTSMLKDLKNERNKIIELEEKLKALEEQNSQRQEEYDSNKSTHENELLVLKA 495
Query: 565 TYENPYIVDKSQLEEIERKLEPLMSKNKRNSV 660
+E K QLEE+E++ ++K + ++
Sbjct: 496 KHEEELKETKQQLEELEKEKSEKLTKEQEEAL 527
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 415 EKSKIAKLLHDVAVKENQLPERCSGLVKDIREK-FGKDSNEDEDKVESVDETYENPYIVD 591
E+SK+ +L+H++A + +L E S V ++R+K GK E+ E + ++ + D
Sbjct: 406 ERSKVKELVHEIAELKEKLQE--SEKVIELRKKDLGKKDKTIEELKERIIVLEKS--LKD 461
Query: 592 KS-QLEEIERKLEPLMSKNKR 651
K+ ++ IE K+ L +KN R
Sbjct: 462 KNDEIFGIEGKIAELEAKNDR 482
>SB_8758| Best HMM Match : E-MAP-115 (HMM E-Value=0.25)
Length = 322
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +1
Query: 412 EEKSKIAKLLHDVAVKENQL---PERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPY 582
E K + + HD +KE ER L ++ + K +++DKV+ DET E
Sbjct: 85 EFKELVRIIEHDRKLKEFMRVKGEERADMLEGELSSR--KKKKDEKDKVDKADETIEAKA 142
Query: 583 IVDKSQLEEIERKLE-PLMSKNKRNSV 660
++K + E +E + E + KNK +
Sbjct: 143 DIEKFKSEGVEMEAERKAILKNKEEKL 169
>SB_23180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 415 EKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDK 594
EK K+L + Q+ E+ + +V D + G + N + KV + + E P V
Sbjct: 9 EKESPWKILLFILTDPQQMQEK-TNIVADNAARLGLNINRGKSKVFKTNASNETPITVQG 67
Query: 595 SQLEEIE 615
LEE++
Sbjct: 68 EALEEVD 74
>SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 415 EKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVES-VDETYENPYIVD 591
EK K K + A+K+N+L R K+I E G ++E+ +K+ S +D E ++D
Sbjct: 378 EKQKFRKTPFNYAIKKNELIRR-----KEIAETSG--NHEEAEKIRSELDNLEERAQVLD 430
Query: 592 KSQLEEIERKLEPLMSKNKRN 654
K + R L + N+RN
Sbjct: 431 KQR----SRGLSAISYINERN 447
>SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3889
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 343 ATVYFINNTKPDIIEQFSKMM--TDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKF 516
A V I T I F++++ T++ +K+ K + + K + ER K R++
Sbjct: 448 AAVGHIEQTLISITAYFTRLIQETNQRAAKVEKGIQEKITKAEEYLERLESNEK--RKQE 505
Query: 517 GKDSNEDEDKVESVDETYEN 576
G N D++ E+ +ETYEN
Sbjct: 506 GTYGN-DKETYENDEETYEN 524
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +1
Query: 379 IIEQFSKMMTDEEKSKIAKLLHDVAVKENQLP-ERCSGLVKDIRE-KFGKDSNEDEDKVE 552
II+Q + + E + A+LL + + E + ER +++ + ++ + E+ED+ +
Sbjct: 2219 IIQQ--RQEEERESQRKARLLEEQRLLEERAEMERAKRELEERKAARYHEPQEEEEDEED 2276
Query: 553 SVDETYENPYIV---DKSQLEEIERKLEPLMSKNKR 651
+V+ + E P V D SQ + +R EP K R
Sbjct: 2277 AVNVSPEKPQNVRKLDLSQFSKFQRAAEPTPQKPPR 2312
>SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51)
Length = 976
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 508 EKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLE 627
EK KD ++D+D+ + ++ E +D+ +EEIE LE
Sbjct: 463 EKKDKDKDKDKDEEDDSSDSEEEREAMDEMIMEEIEAALE 502
>SB_41007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 490 LVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASP 669
L +DI + F D NE D+ +D+ EN +D QL+++E+ P+ + N +AS
Sbjct: 146 LQRDITDYFDDDDNELLDEDLFLDDIEEN---LDFDQLDQLEKGALPIRNSASEN-IASL 201
Query: 670 NL 675
+L
Sbjct: 202 HL 203
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 520 KDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVAS 666
+D E+E++ + VDE+ ++ ++ QLEE ER ++ + K + V S
Sbjct: 3241 EDICEEEEEEKDVDESVDDKDFEERRQLEEYERLESFVLLEEKLSQVES 3289
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 397 KMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 576
K + D + + +A L H + Q+ E+ + +V D K G + N + K+ + + E
Sbjct: 331 KQLDDLDFADLALLFHT----QQQMQEK-TNIVADNSAKLGLNINRGKSKMFKTNASNET 385
Query: 577 PYIVDKSQLEEIE 615
P V LEE++
Sbjct: 386 PITVQGETLEEVD 398
>SB_2282| Best HMM Match : PHZA_PHZB (HMM E-Value=4.4)
Length = 660
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 451 AVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEP 630
++++ + P +GLV++I DED E V P + +K EE+ R+L+P
Sbjct: 11 SMRDKEAPAVLAGLVQNIL---------DEDITEDVKHRLLKPLVPEKVWTEEVWRELDP 61
Query: 631 LMSKNKRNSVAS 666
L+ ++ S
Sbjct: 62 LLPGRRQEGPES 73
>SB_47535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 433 KLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVES-VDETYENPYIVDKSQLE 606
K L +VA ++ S + + I K +D N D ++ V+E NPY++DK + +
Sbjct: 161 KFLKEVAKNPQKIWVEKSNMHRGIHIKKPQDINLDSSSRDTFVEEFISNPYLIDKRKCD 219
>SB_51841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 463 NQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERK---LEPL 633
N +R V++ +EK ++ED K+E ++ N I++ + E+E K L+ +
Sbjct: 16 NGYVQRNLSFVRNRKEKIDYKTDEDLAKLEMMNTKKPNKEILEHQKKREVELKCMELQDM 75
Query: 634 MSKNKRNSVAS 666
M + R SV S
Sbjct: 76 MEEQGRCSVDS 86
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/92 (26%), Positives = 37/92 (40%)
Frame = +1
Query: 382 IEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 561
+E ++ D K KI + PE+ L ++ R K D ED +S+
Sbjct: 448 LENLMRLDLDGNKLKIKADKVPKLTTKVLYPEKDPALKENWRGKVRGDKLAGEDFSQSIA 507
Query: 562 ETYENPYIVDKSQLEEIERKLEPLMSKNKRNS 657
E ENP + EE E E + S +R +
Sbjct: 508 ELLENPEEAQSNGGEEEEECEETVYSPGEREA 539
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 484 SGLVKDIREKFGKDSNEDEDK 546
SGL KD ++FG +S EDE +
Sbjct: 217 SGLSKDAADRFGNESGEDEPR 237
>SB_39171| Best HMM Match : EzrA (HMM E-Value=0.16)
Length = 587
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/91 (21%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +1
Query: 382 IEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIR--EKFGKDSNEDEDKVES 555
I+ ++++T++ K+++ +L+ +EN L++ IR E+ G+ + DK+E+
Sbjct: 249 IDSSNRLLTEKHKAEMLRLVSQKLEEENNWVTERQKLIEKIRELEELGRCQKDAIDKLEN 308
Query: 556 VDETYENPYIVDKSQLEEIERKLEPLMSKNK 648
+ +D ++++ +R+LE +NK
Sbjct: 309 SCHLKND---LD-FEIQQRDRELERAKKENK 335
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +1
Query: 364 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDED 543
+T + E K++T E + K L + + Q E + + E K +NE
Sbjct: 785 STVQQLCEVEGKLVTRESE---VKSLREELTRMQQGSEELKKKIASLEESLIKANNEIGK 841
Query: 544 KVESVDETYENPYIVDKSQ 600
ES+D + +P VDK +
Sbjct: 842 SQESLDSIHNSPEKVDKKK 860
>SB_16527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 535 DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVAS 666
DED + V P + K EE+ R+ +PLMS ++ S
Sbjct: 126 DEDIPDDVKHKLLKPLVPAKVWTEEVRREFDPLMSGRRQKGPES 169
>SB_8756| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 346
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 340 KATVYFINNTKPDIIEQFSKMMTDEE-KSKIAKLLHDVAVKENQLPERCSGLVKDIREKF 516
KA + IN K D + ++ E KS+ ++ A+ EN ER S + RE F
Sbjct: 165 KANLLLIN--KADYLTPSQRLKWAEYYKSRNIQVAFWSALAEN---ERLSEEQEKSREDF 219
Query: 517 GKDSNEDEDKVESVDETYEN 576
++++ E+K E +DE+ E+
Sbjct: 220 TQETDSTEEKKEKIDESEED 239
>SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 170 PIYIPSIPKNAAHGNKKQNNFILGHN 93
P+Y P+ + N +NNFILG N
Sbjct: 252 PVYHPTFQNMYVYSNITENNFILGSN 277
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 385 EQFSKMMTDEEKSKIAKLLHDV--AVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESV 558
E+ K + K+K AK + + K+ +L E +++++++ K+ E +DK S
Sbjct: 824 EEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKMQELKKQKQKEEEEKQDKTLSS 883
Query: 559 DETYEN 576
+++EN
Sbjct: 884 KKSFEN 889
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 364 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDE- 540
NTK DI+E +K M D + + K D + Q + + L DI+EK + S +
Sbjct: 574 NTKNDILEDQAKEMHD-DLLEANKRAADAEDELQQTEDELNRLKNDIQEKEKRISELESA 632
Query: 541 -DKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 642
D + E + +++ +E +L+ +++
Sbjct: 633 FDAADKEKRDLEQQVLSQTPKIKRLESELQDALNR 667
>SB_53789| Best HMM Match : ResIII (HMM E-Value=0.044)
Length = 942
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 535 DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 642
DED E V P ++ +++ EE+ RK +PL+ +
Sbjct: 30 DEDIPEDVKHKLLKPLVLAEARPEEVWRKFDPLLEQ 65
>SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 592 KSQLEEIERKLEPLMSKNKRNSVASP 669
+ +L+EI RK+ L+ KN++N + +P
Sbjct: 80 RDRLKEINRKISDLICKNRKNILQAP 105
>SB_1074| Best HMM Match : ScdA_N (HMM E-Value=2.4)
Length = 694
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 451 AVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEP 630
++++ + P +GLV++I DED ++ V P + +K EE+ R+ +P
Sbjct: 11 SMRDKEAPAVLAGLVQNIL---------DEDIIDDVKHRLLKPLVPEKVWTEEVWREFDP 61
Query: 631 LMSKNKRNSVAS 666
L+ ++ S
Sbjct: 62 LLPGRRQEGPES 73
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,783,535
Number of Sequences: 59808
Number of extensions: 415511
Number of successful extensions: 1331
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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