Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10g19
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 31 0.53
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 31 0.53
At4g23770.1 68417.m03419 expressed protein 31 0.70
At4g19150.1 68417.m02825 ankyrin repeat family protein contains ... 30 1.2
At4g10710.1 68417.m01751 transcriptional regulator-related simil... 30 1.2
At2g05950.1 68415.m00646 hypothetical protein 30 1.6
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 29 2.1
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 29 2.1
At5g55920.1 68418.m06975 nucleolar protein, putative similar to ... 29 2.1
At5g42490.1 68418.m05172 kinesin motor family protein contains P... 29 2.1
At3g02400.1 68416.m00227 forkhead-associated domain-containing p... 29 2.8
At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger) fa... 29 2.8
At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger) fa... 29 2.8
At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A) co... 29 3.8
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 29 3.8
At1g31660.1 68414.m03887 bystin family contains Pfam profile: PF... 29 3.8
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 29 3.8
At5g40450.1 68418.m04905 expressed protein 28 5.0
At5g02830.1 68418.m00225 pentatricopeptide (PPR) repeat-containi... 28 5.0
At4g31270.1 68417.m04438 expressed protein 28 5.0
At3g57980.1 68416.m06462 DNA-binding bromodomain-containing prot... 28 5.0
At2g36200.1 68415.m04444 kinesin motor protein-related 28 5.0
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 28 5.0
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 28 5.0
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 28 5.0
At1g75850.1 68414.m08810 vacuolar protein sorting-associated pro... 28 5.0
At1g64880.1 68414.m07355 ribosomal protein S5 family protein con... 28 5.0
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 28 6.6
At2g28030.1 68415.m03397 aspartyl protease family protein contai... 28 6.6
At2g07440.1 68415.m00852 two-component responsive regulator-rela... 28 6.6
At1g32010.1 68414.m03938 myosin heavy chain-related 28 6.6
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 28 6.6
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 28 6.6
At5g64820.1 68418.m08155 hypothetical protein 27 8.7
At4g37250.1 68417.m05273 leucine-rich repeat family protein / pr... 27 8.7
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 370 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFG---KDSNEDE 540
KP + ++MT EEKSK+ L D+ PE+ L++ +R++ G +D +E E
Sbjct: 393 KPKAKDPNKRLMTMEEKSKLGMNLQDLP------PEKLGQLLQILRKRNGHLAQDGDEIE 446
Query: 541 DKVESVD 561
+E+VD
Sbjct: 447 LDIEAVD 453
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/95 (23%), Positives = 48/95 (50%)
Frame = +1
Query: 364 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDED 543
N+K + + K+ T EKS+ A++ + Q R S + +D+++ + S+ ++D
Sbjct: 62 NSKSSVERRSPKLPTPPEKSQ-ARVAAVKGTESPQTTTRLSQIKEDLKKANERISSLEKD 120
Query: 544 KVESVDETYENPYIVDKSQLEEIERKLEPLMSKNK 648
K +++DE + K + E++ KL+ + K
Sbjct: 121 KAKALDELKQ-----AKKEAEQVTLKLDDALKAQK 150
>At4g23770.1 68417.m03419 expressed protein
Length = 138
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 391 FSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGL-VKDIREKFGKDSNEDEDKVESVDET 567
F++ M ++K + + H+ +K +L E+ G V+D+ K K++ E ++ +E
Sbjct: 21 FAEHMILKDKYESLVIEHESLIKTLELLEKTHGFTVEDLVTK-QKEALEKKEVIEK---- 75
Query: 568 YENPYIVDKSQLEEIERKLEPLMSKNKRNSVAS 666
+EN + + +L+ +ER +E +MS + + V S
Sbjct: 76 WENKFGEMEKKLKTVERSIEYIMSVDVQTGVDS 108
>At4g19150.1 68417.m02825 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 243
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 412 EEKSKIAKLLHDVAVKENQLPERCS--GLVKDIREKFGKDSNEDEDKVES 555
EE+++ AK+ ++ E PE CS G VKD++ K +D NE E++ S
Sbjct: 169 EEQARKAKVNNEKKT-EIVKPESCSNEGDVKDLKRKDSEDGNEGEEEEAS 217
>At4g10710.1 68417.m01751 transcriptional regulator-related similar
to chromatin-specific transcription elongation factor
FACT 140 kDa subunit (GI:5499741) [Homo sapiens]
Length = 1074
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 415 EKSKIAKLLHDVAVKENQLPE---RCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 576
+ K + LL D + +Q PE +CS VKD+ F +D E++ + ++ EN
Sbjct: 424 KNKKFSLLLADTVLVTDQKPELLTKCSKSVKDVAYSFKEDEEEEKPRKKARTSGSEN 480
>At2g05950.1 68415.m00646 hypothetical protein
Length = 183
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +1
Query: 448 VAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLE 627
V K + ++C + I + N+D D + YE Y+ + +L ++++ +E
Sbjct: 113 VCKKAELIAKKCRNMEHQI---LSQRDNDDADPIVDASPNYEEMYLETQEKLRKLDQVIE 169
Query: 628 PLMSKNK 648
+M K K
Sbjct: 170 GMMLKFK 176
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Frame = +1
Query: 364 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLV-------KDIREKFGK 522
+++ + E K+ + E+K K+ K LHD+AV +L L+ +I + F +
Sbjct: 244 SSRASVSESGQKVFSVEDKEKLEKQLHDMAVALERLESSRQKLLMEIDNQSSEIEKLFEE 303
Query: 523 DSNEDEDKVESVD--ETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPN 672
+SN ES++ +EN Q E+ L+ L ++ + P+
Sbjct: 304 NSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAGSFSRGPS 355
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Frame = +1
Query: 358 INNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLV-------KDIREKF 516
+++ ++ E K+ + E+K K+ K LHD+AV +L L+ +I + F
Sbjct: 243 LSSRASEVSESGQKVFSVEDKEKLEKQLHDMAVALERLESSRQKLLMEIDNQSSEIEKLF 302
Query: 517 GKDSNEDEDKVESVD--ETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPN 672
++SN ES++ +EN Q E+ L+ L ++ + P+
Sbjct: 303 EENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAGSFSRGPS 356
>At5g55920.1 68418.m06975 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}, SP|P40991 Nucleolar protein NOP2
{Saccharomyces cerevisiae}; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 682
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +1
Query: 526 SNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRN 654
S++D+D+ E+++ET E P + + E E+K + ++K+K +
Sbjct: 588 SSDDDDEAEAIEET-EKPSVPVRQPKERKEKKNKEKLAKSKED 629
>At5g42490.1 68418.m05172 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1087
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 505 REKFGKDSNEDED-KVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPN 672
+++ KD NE K D+ + Y+ K +++E+++K+E LMS + SP+
Sbjct: 653 QQEADKDCNESSVCKNIGTDDNDNDTYMALKEKVKEMQKKIEYLMSMHTAEQQQSPS 709
>At3g02400.1 68416.m00227 forkhead-associated domain-containing
protein / FHA domain-containing protein / AT hook
motif-containing protein contains Pfam profiles PF00498:
FHA domain, PF02178: AT hook motif
Length = 585
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 385 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 561
E + D+ ++ K H KEN+ E CSG DI ++ + + +VE V+
Sbjct: 339 EPSKETRNDDAGEEVLKNCHVEEDKENEAQEGCSGRSDDICDQEDEKECDGSKRVEQVE 397
>At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1
Query: 223 LMNSFWCKQVDGNTKRNSLYTFLAYPKMQHTVTRNKIILY 104
LM SFW Q+ N R+S Y + TVTR I LY
Sbjct: 401 LMYSFWIPQIVANVVRDSRKPLHPYYILGMTVTRLAIPLY 440
>At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -1
Query: 223 LMNSFWCKQVDGNTKRNSLYTFLAYPKMQHTVTRNKIILY 104
LM SFW Q+ N R+S Y + TVTR I LY
Sbjct: 401 LMYSFWIPQIVANVVRDSRKPLHPYYILGMTVTRLAIPLY 440
>At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A)
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA putative histone deacetylase (HD2A)
GI:11066134
Length = 245
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 340 KATVYFINNTKPDIIEQ-FSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKF 516
K +VYF+ P+I Q +S+ +EE+ A K P V D ++
Sbjct: 84 KGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPAGNAAKAVAKPKAKPAEVKPAVDDEEDES 143
Query: 517 GKDSNEDEDKVESVDETYENP 579
D DED + D E P
Sbjct: 144 DSD-GMDEDDSDGEDSEEEEP 163
>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
identical to abscisic acid-insensitive protein 3
GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
Cell 4 (10), 1251-1261 (1992))
Length = 720
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +1
Query: 499 DIREKFGK----DSNE--DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSV 660
D+ E FG DSNE D + S D+ +NP ++D++ + ++ + P+M N +
Sbjct: 174 DMMETFGYMDLLDSNEFFDTSAIFSQDDDTQNPNLMDQTLERQEDQVVVPMMENNSGGDM 233
Query: 661 ASPN 672
N
Sbjct: 234 QMMN 237
>At1g31660.1 68414.m03887 bystin family contains Pfam profile:
PF05291 Bystin
Length = 442
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 532 EDEDKVESVDETYENPYIVDKSQ--LEEIERKLEPLMSKN 645
E+ED ++ D T+EN DK + E+ E+ E ++KN
Sbjct: 92 EEEDDIDDFDGTFENQSQFDKQEEINEDDEKLFESFLNKN 131
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 385 EQFSKMMTDEEKSKIAKLLHDVAVKE-NQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 561
E ++ TDEE+ K+A + + KE N PE K + E + + E+K + +
Sbjct: 863 ELTAERKTDEEEHKVADEVEQKSQKETNVEPEAEGEEQKSVEEPNAEPKTKVEEKESAKE 922
Query: 562 ETYENPYI----VDKSQLEEIERK 621
+T + I + K++ EEI+++
Sbjct: 923 QTADTKLIEKEDMSKTKGEEIDKE 946
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +1
Query: 379 IIEQFSKMMTDEEKSKIAKLL----HDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDK 546
++E + T+E + +K+L H E+ + S + + D ++ED
Sbjct: 277 VVEDAKIVNTEETTAHESKILKEDNHQEEYAESVEATKNSDAAEQSSREVTVDKEKEEDI 336
Query: 547 VESVDETYENPYIVDKS--QLEEIERK 621
+++++E E+P +++ Q E+IE K
Sbjct: 337 IQNIEEVQESPSVMESPTIQGEDIESK 363
>At5g02830.1 68418.m00225 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 852
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 51 VKIYKNVQLRTYVHVMS*YKIILFLVTVCCIFG---YARNVYRE 173
+K+YKN+Q+ M+ Y I+L CC+ G A+++Y+E
Sbjct: 320 LKVYKNMQILDVTADMTSYNILL---KTCCLAGRVDLAQDIYKE 360
>At4g31270.1 68417.m04438 expressed protein
Length = 294
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +1
Query: 328 PMVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIR 507
P+ TKAT N T + + M TDEE+ + + DV V E +L + + +
Sbjct: 187 PITTKATHQ--NKTMGEK-KPVEDMSTDEEEDETMNIEEDVEVMEAKLSYKIDLIHAIVG 243
Query: 508 EKFGKDSNEDEDKVESVDE 564
KD NE +D V D+
Sbjct: 244 RNLAKD-NETKDGVSMDDK 261
>At3g57980.1 68416.m06462 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 632
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 382 IEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 561
+E+ K+ DE + ++ + +D+++ QL + ++D REK K N D D++
Sbjct: 76 LEELRKLRVDELRREVER--YDLSISSLQLKVKT---LEDEREKSLKTENSDLDRIAETK 130
Query: 562 ETY 570
E +
Sbjct: 131 ENH 133
>At2g36200.1 68415.m04444 kinesin motor protein-related
Length = 1056
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Frame = +1
Query: 358 INNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQL----PERC--SGLVKD-IREKF 516
+ DII+Q + M+++EK+ ++K+L +V E L ++C + ++D +E F
Sbjct: 881 VTKNSDDIIQQIER-MSEDEKASVSKILENVRSHEKTLESFQQDQCCQARCIEDKAQETF 939
Query: 517 GKDSNEDEDKVESVDETYENPYIVDKSQLEEIE-RKLEPLMSKNKRNS 657
+ E E T P I K+ +E + +E L+ + + N+
Sbjct: 940 QQQYMEYEP--TGATPTKNEPEIPTKATIESLRAMPIETLVEEFRENN 985
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3
Query: 167 IYIPSIPKNAAHGNKKQNNFILGHNMNIGAQLNIFINFHSQNLLY*ARS 21
+ +P + N AH Q NF L M F N SQ LLY AR+
Sbjct: 471 LQMPDVWVNLAHVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLART 519
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3
Query: 167 IYIPSIPKNAAHGNKKQNNFILGHNMNIGAQLNIFINFHSQNLLY*ARS 21
+ +P + N AH Q NF L M F N SQ LLY AR+
Sbjct: 683 LQMPDVWVNLAHVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLART 731
>At1g79940.1 68414.m09342 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 702
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 487 GLVKDIREKFGKDSNEDEDKVES--VDETYENPYIVDKSQLEEIERK 621
GLV D ++ E+ED++E D+ YE+ Y D+ + ++++ K
Sbjct: 631 GLVSD-EGAIAEEGMEEEDEIEEEDYDDDYESEYSEDEDEKKDMDEK 676
>At1g75850.1 68414.m08810 vacuolar protein sorting-associated
protein 35 family protein / VPS35 family protein similar
to vacuolar protein sorting 35 [Mus musculus]
GI:11875394; contains Pfam profile PF03635: Vacuolar
protein sorting-associated protein 35
Length = 838
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 451 AVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEP 630
A K L E GL+KD+ E ++ +E ED E + +++D + EE+ + + P
Sbjct: 477 ADKVEVLFELIKGLIKDLDETNAEELDE-EDFQEEQNSVARLIHMLDNEEPEEMLKSVAP 535
Query: 631 LMSKN 645
L K+
Sbjct: 536 LHPKH 540
>At1g64880.1 68414.m07355 ribosomal protein S5 family protein
contains similarity to 30S ribosomal protein S5
GI:6969105 from [Campylobacter jejuni]
Length = 515
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 520 KDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 642
KD N+D+D E D+ E I+ +L I++KLE +S+
Sbjct: 280 KDDNDDDDDEEEFDDMKERDDIL-LEKLNAIDKKLEIKLSE 319
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 454 VKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDET-YENPYIVDKSQLEEIER 618
V +++ P G+ K + ++ + E+K ES+++T E P ++ +LEE E+
Sbjct: 212 VTKSEKPRDQEGVKKTEAKDKDRNKEKKEEKTESINKTRQEKPKLIRGPKLEEREK 267
>At2g28030.1 68415.m03397 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 392
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 149 PKNAAHGNKKQNNFILGHN 93
P++A GN+ QNNF++G++
Sbjct: 356 PQDAIFGNRAQNNFLVGYD 374
>At2g07440.1 68415.m00852 two-component responsive regulator-related
/ response regulator protein-related similar to response
regulator 5 GI:3953599 from [Arabidopsis thaliana];
non-consensus (GC) donor site at intron 1
Length = 136
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +1
Query: 502 IREKFGKDSNED---EDKVESVDETYENPYIVDKSQL-EEIE-RKLEPLMSKNKRNSV 660
++ K K+S + E+ V S E E ++D L +E+E +LEP++S NKR ++
Sbjct: 59 MKTKLKKESEKPVAIEEIVVSKPEIEEESLVIDILPLHQEVESEQLEPMLSSNKRKAM 116
>At1g32010.1 68414.m03938 myosin heavy chain-related
Length = 835
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 457 KENQLPERCSG----LVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKL 624
K + P++ SG L +REK + E + ++ VD+T+E DK++L+ E+
Sbjct: 336 KSSARPKKMSGENVNLATLMREKRARKEAESKARLAIVDKTHE-----DKARLDVAEKNR 390
Query: 625 EPLMSKNKRNS 657
+ L K K+ +
Sbjct: 391 KGLEDKTKKGT 401
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = +1
Query: 463 NQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 642
N+ ++ G + I E+ ++ N+ E+KV +++ + + + +LEE RK++ MSK
Sbjct: 266 NEWEKKLQGKEESITEQ-KRNLNQREEKVNEIEKKLK----LKEKELEEWNRKVDLSMSK 320
Query: 643 NK 648
+K
Sbjct: 321 SK 322
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = +1
Query: 463 NQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 642
N+ ++ G + I E+ ++ N+ E+KV +++ + + + +LEE RK++ MSK
Sbjct: 279 NEWEKKLQGKEESITEQ-KRNLNQREEKVNEIEKKLK----LKEKELEEWNRKVDLSMSK 333
Query: 643 NK 648
+K
Sbjct: 334 SK 335
>At5g64820.1 68418.m08155 hypothetical protein
Length = 145
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 499 DIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEE 609
D R K + E+EDK E V E V K +EE
Sbjct: 80 DFRSNSDKSNIEEEDKAEKVREAATRSLEVSKEAIEE 116
>At4g37250.1 68417.m05273 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 768
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 146 KNAAHGNKKQNNFILGHNM 90
K HGN K +N +LGH+M
Sbjct: 571 KKHVHGNLKPSNILLGHDM 589
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,252,727
Number of Sequences: 28952
Number of extensions: 305011
Number of successful extensions: 1083
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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