Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g18
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z54237-10|CAJ43909.1|  684|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z54237-8|CAE52902.1|  771|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z54237-7|CAB54312.2|  645|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z54235-13|CAJ43902.1|  684|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z54235-10|CAE52905.1|  771|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z54235-9|CAB54190.2|  645|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U61945-3|AAB03126.2|  451|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 294 SNGGTCSTNKTDEDGCEVRDIYAIRSHGYCSAC 392
           +N   CS N  +  GC  R  Y   + GY S C
Sbjct: 60  NNNNGCSCNPCNGGGCAPRCSYCPNNFGYSSCC 92


>Z54237-10|CAJ43909.1|  684|Caenorhabditis elegans Hypothetical
           protein T11B7.4e protein.
          Length = 684

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168 LNFIREHWSPVCGTCCHNYDP 230
           LN +++ W P C TC H   P
Sbjct: 584 LNALQKKWHPTCFTCAHCQKP 604


>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
            T11B7.4d protein.
          Length = 1424

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168  LNFIREHWSPVCGTCCHNYDP 230
            LN +++ W P C TC H   P
Sbjct: 1324 LNALQKKWHPTCFTCAHCQKP 1344


>Z54237-8|CAE52902.1|  771|Caenorhabditis elegans Hypothetical
           protein T11B7.4c protein.
          Length = 771

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168 LNFIREHWSPVCGTCCHNYDP 230
           LN +++ W P C TC H   P
Sbjct: 671 LNALQKKWHPTCFTCAHCQKP 691


>Z54237-7|CAB54312.2|  645|Caenorhabditis elegans Hypothetical
           protein T11B7.4b protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168 LNFIREHWSPVCGTCCHNYDP 230
           LN +++ W P C TC H   P
Sbjct: 545 LNALQKKWHPTCFTCAHCQKP 565


>Z54235-13|CAJ43902.1|  684|Caenorhabditis elegans Hypothetical
           protein T11B7.4e protein.
          Length = 684

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168 LNFIREHWSPVCGTCCHNYDP 230
           LN +++ W P C TC H   P
Sbjct: 584 LNALQKKWHPTCFTCAHCQKP 604


>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
            protein T11B7.4d protein.
          Length = 1424

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168  LNFIREHWSPVCGTCCHNYDP 230
            LN +++ W P C TC H   P
Sbjct: 1324 LNALQKKWHPTCFTCAHCQKP 1344


>Z54235-10|CAE52905.1|  771|Caenorhabditis elegans Hypothetical
           protein T11B7.4c protein.
          Length = 771

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168 LNFIREHWSPVCGTCCHNYDP 230
           LN +++ W P C TC H   P
Sbjct: 671 LNALQKKWHPTCFTCAHCQKP 691


>Z54235-9|CAB54190.2|  645|Caenorhabditis elegans Hypothetical
           protein T11B7.4b protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 168 LNFIREHWSPVCGTCCHNYDP 230
           LN +++ W P C TC H   P
Sbjct: 545 LNALQKKWHPTCFTCAHCQKP 565


>U61945-3|AAB03126.2|  451|Caenorhabditis elegans Hypothetical
           protein C49C8.5 protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
 Frame = +3

Query: 231 RDHGGIQIG*CGN*SNARCRYSNGGTCSTNKTDED---GCEVRDIYAIRSHGY 380
           + +GG   G CGN  N     +N G CS  K D     G  +R      + GY
Sbjct: 368 KGYGGWWYGSCGNNLNGFLYPNNNGDCSVTKFDSTLLLGINMRTTTGTATGGY 420


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,316,769
Number of Sequences: 27780
Number of extensions: 294591
Number of successful extensions: 849
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)