Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g17
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   3.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -1

Query: 510 TIEAMNENIENDKWSEFENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSY 331
           TIE  N+  E     + E++     I +   Q+ NE+    A  FF+ N T+ +S++   
Sbjct: 583 TIEEANKAGELIHKIDTEDHDIRDEIEMFSLQIANEQVEFNAAGFFAINYTLVFSILGGV 642

Query: 330 SKNIIL 313
           +  II+
Sbjct: 643 TTYIII 648


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -1

Query: 510 TIEAMNENIENDKWSEFENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSY 331
           TIE  N+  E     + E++     I +   Q+ NE+    A  FF+ N T+ +S++   
Sbjct: 308 TIEEANKAGELIHKIDTEDHDIRDEIEMFSLQIANEQVEFNAAGFFAINYTLVFSILGGV 367

Query: 330 SKNIIL 313
           +  II+
Sbjct: 368 TTYIII 373


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 442 FLDVIFEFTPLVVFYIFIHCFNCFFRIRNVH 534
           FL  I+ F   + F + I+ F C F I  VH
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFYCAFIIFTVH 159


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 555 NQAPKDLNSMVDGI 596
           NQ P+DLN  VD I
Sbjct: 288 NQVPRDLNREVDQI 301


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 186 T*PST*QSYSSLVLYDPSLRTIGLK 112
           T P+    ++ L+L  P+LR+IGLK
Sbjct: 353 THPNEPGRFAKLLLRLPALRSIGLK 377


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 343 DGIKNCFVLRKKFVGQTNLFFIQYLSNINVNSGFLDVIFE 462
           DG+ N  +    FV  TN+ F    + INV SG L V  +
Sbjct: 441 DGVMN--INGVLFVFLTNMTFQNVFAVINVFSGELPVFLQ 478


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 343 DGIKNCFVLRKKFVGQTNLFFIQYLSNINVNSGFLDVIFE 462
           DG+ N  +    FV  TN+ F    + INV SG L V  +
Sbjct: 441 DGVMN--INGVLFVFLTNMTFQNVFAVINVFSGELPVFLQ 478


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 430 VNSGFLDVIFEFTPLVVFYIFIHCFNCFFRIRN 528
           +NS  +DV +EF  + +  I I  F   ++  N
Sbjct: 172 LNSCLMDVYYEFLLISLINILIRSFKSRYKDLN 204


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 165  IVMWKATLNVFGVSVTDITASTTSQKN 245
            IVM   T  +  V+V D   ST  +KN
Sbjct: 1361 IVMSSVTYGIDTVAVCDACYSTIEEKN 1387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,460
Number of Sequences: 336
Number of extensions: 3189
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)