Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g16
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0529 + 24687027-24687064,24687150-24687610,24687709-246881...    29   4.4  
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731...    28   7.7  
07_01_0549 + 4082672-4082731,4083424-4083489,4083628-4083674,408...    28   7.7  
05_06_0063 + 25289117-25290643                                         28   7.7  
05_05_0127 - 22580720-22580808,22580936-22580987,22581703-225819...    28   7.7  
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420...    28   7.7  
03_02_0359 - 7788382-7788522,7788931-7789837,7791227-7791337,779...    28   7.7  

>11_06_0529 +
           24687027-24687064,24687150-24687610,24687709-24688124,
           24688688-24688860,24689733-24689868,24689914-24690264,
           24691170-24691344,24691761-24691822
          Length = 603

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 322 ALIEALLVTFFKGFNFVLCEFVVAQWV 242
           AL+ + +V    G NF +C+F +A+W+
Sbjct: 320 ALLNSQIVVLVFGLNFQICDFGLAKWL 346


>07_03_0011 +
           12370624-12370684,12372573-12372718,12372793-12373129,
           12374323-12374452,12375346-12375406,12375572-12375618,
           12376873-12376950,12377195-12377345,12377495-12377558,
           12377735-12377893,12378007-12378128,12378952-12378981,
           12379050-12379124,12379563-12379644,12379809-12379938,
           12381417-12382164,12382833-12383054,12383127-12383276,
           12384851-12384904,12384985-12385058,12386130-12386204,
           12386365-12386584
          Length = 1071

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 364 CRQIWTSETKPKIWSIPKGDIGS 432
           C   W+ ++  +IW+IP G  GS
Sbjct: 283 CMSGWSGDSTARIWTIPDGPCGS 305


>07_01_0549 +
           4082672-4082731,4083424-4083489,4083628-4083674,
           4083757-4083802,4083905-4083985,4084105-4084147,
           4084258-4084307,4084392-4084473,4084538-4084587,
           4084687-4084760,4084870-4084921,4085034-4085459,
           4085816-4086403
          Length = 554

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +3

Query: 198 SLAPATHVLPSETSHTHCATTNSHKTKLKPLKNVTRRAS 314
           S  P   + PS+T H   A T   K  L+     TRRAS
Sbjct: 340 SSTPRIRLEPSKTFHARAAETPPSKCSLERASQPTRRAS 378


>05_06_0063 + 25289117-25290643
          Length = 508

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 228 SETSHTHC-ATTNSHKTKLKPLKNVTRRASINA 323
           S++S   C AT +S + + +PL ++TR AS+NA
Sbjct: 349 SDSSVASCPATLSSEERRQRPLGSLTRPASLNA 381


>05_05_0127 -
           22580720-22580808,22580936-22580987,22581703-22581908,
           22582019-22582152,22582239-22582369,22583333-22583392,
           22583615-22583755,22583880-22584347,22584524-22584686,
           22585373-22585476,22585755-22585853,22586177-22586281,
           22586516-22586596,22587168-22587986,22588497-22588553
          Length = 902

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 630 PGPASEYISLVVAPYIEGVCTGIEVPPIFPFF 535
           PGP  +YI+   AP +E    G +VP I P F
Sbjct: 297 PGPQDQYINQAHAPVLENQYAG-QVPRIAPGF 327


>04_04_1457 -
           33741048-33741146,33741647-33741760,33741938-33742052,
           33742154-33742560,33743342-33743476,33743576-33743970,
           33744225-33744916,33745014-33745097,33745195-33745286,
           33745374-33745457,33745535-33745714,33746258-33746302,
           33746399-33746692,33747199-33747585,33747713-33747899,
           33748042-33748118,33748936-33749067,33749315-33749416,
           33749744-33749827,33749902-33749992,33750105-33750178,
           33750644-33750664,33751433-33751477,33752427-33752561,
           33752693-33752752
          Length = 1376

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 383 LKPNPRFGPFPKVTLAVVVGYFLGKLSY 466
           +KPN +FGPFP+  +AV +   L  L Y
Sbjct: 123 IKPN-KFGPFPESLVAVYIAQVLEGLVY 149


>03_02_0359 -
           7788382-7788522,7788931-7789837,7791227-7791337,
           7791437-7791507,7791582-7791659,7792564-7792770,
           7792867-7793046,7793249-7793471,7794133-7794453,
           7794538-7795109
          Length = 936

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 451 QEVANHYCQCHLWEWTKSWVWFQMSIFDGSVC*RSE 344
           Q   NH       EWT +W  FQ S+FD   C R +
Sbjct: 271 QNRRNHLILPKALEWTLNWCIFQ-SMFDSKFCVRKD 305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,276,961
Number of Sequences: 37544
Number of extensions: 421521
Number of successful extensions: 1282
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)