Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g15
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0903 - 6939672-6939782,6940051-6940110,6940221-6940322,694...    40   0.002
09_04_0516 - 18246439-18246582,18246763-18246899,18247067-182470...    28   7.1  
05_03_0382 + 13342764-13342958,13343178-13343278,13343373-133434...    28   7.1  
09_04_0518 - 18261420-18261953,18262054-18262626,18262736-182629...    28   9.4  
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793...    28   9.4  
02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672...    28   9.4  

>06_01_0903 -
           6939672-6939782,6940051-6940110,6940221-6940322,
           6940464-6940513,6940686-6940750,6940849-6940931,
           6941117-6941140,6941798-6941856,6942041-6942174,
           6942823-6942884,6942908-6942976
          Length = 272

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 654 LFNQYKDSIEDAILAEGIENLCNDLNLSPDDFKVLILA 767
           L+N+YK+   D I+ EG+   C DL + P D  +L+++
Sbjct: 83  LYNRYKEPDVDMIMVEGVSQFCTDLQVDPQDIVMLVIS 120


>09_04_0516 -
           18246439-18246582,18246763-18246899,18247067-18247097,
           18248097-18248194,18248222-18248291,18248704-18248835,
           18249213-18249386
          Length = 261

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 541 FFCTFNGSHELCSPKEFNTFKLFM 470
           FF    G H LC+PKE++  K+ +
Sbjct: 38  FFVESEGHHNLCTPKEWSFIKILI 61


>05_03_0382 +
           13342764-13342958,13343178-13343278,13343373-13343459,
           13343559-13343709,13343826-13344116,13346058-13346197,
           13346276-13346467,13346559-13346631,13346708-13346852,
           13347017-13347124,13347213-13347306,13348245-13348324,
           13348665-13348738,13349236-13349253
          Length = 582

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 672 DSIEDAILAEGIENLCNDLNLSP 740
           D+  D  LAEG EN+C D N +P
Sbjct: 188 DAAADEPLAEGDENVCIDFNAAP 210


>09_04_0518 -
           18261420-18261953,18262054-18262626,18262736-18262948,
           18263379-18263510,18263591-18263731,18263899-18264120
          Length = 604

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 553 SQTKFFCTFNGSHELCSPKEFNTFK 479
           S   +F    G H LCSPKE++  K
Sbjct: 50  SPAAYFSESEGHHNLCSPKEWSFIK 74


>06_02_0251 -
           13478902-13478952,13478989-13479055,13479168-13479379,
           13480144-13481540,13481574-13482432,13482537-13482836
          Length = 961

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 694 KIASSIESLYWLNNRFILVSDIFSLDPSDDI-VRGIDGNFGLNSLGVFSQTKFFCTFNGS 518
           +I S  E +  LN+  I  S+        DI V+ +DG FG+ S  + S T    T + S
Sbjct: 461 QIGSPDECIDGLNSISIPSSEFEGQKQFPDISVKNVDGIFGIKSSQISSDTDVIGTNDNS 520

Query: 517 HE 512
           H+
Sbjct: 521 HK 522


>02_05_0969 +
           33165396-33165935,33166352-33166883,33166988-33167242,
           33167515-33167606,33167745-33167942,33168049-33168240,
           33168341-33168562,33168858-33169024,33169117-33169210,
           33169308-33169364,33169459-33169587,33169681-33169752,
           33170180-33170293,33170419-33170580,33170666-33170794,
           33171057-33171158,33171266-33171342,33171470-33171592,
           33171666-33172227
          Length = 1272

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +3

Query: 645 INLLFNQYKDSIEDAILAEGIENLCNDLNLSPDDF 749
           I++ F++  +S  D +L E ++NL +  NLS DDF
Sbjct: 435 ISMAFDKLGESSAD-LLPEALKNLADMQNLSDDDF 468


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,381,136
Number of Sequences: 37544
Number of extensions: 298118
Number of successful extensions: 649
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)