Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10g14
(735 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13938| Best HMM Match : Robl_LC7 (HMM E-Value=2.5e-17) 42 5e-04
SB_53948| Best HMM Match : Robl_LC7 (HMM E-Value=9.3e-25) 38 0.008
SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.060
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 35 0.079
SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082) 35 0.079
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_59180| Best HMM Match : FtsX (HMM E-Value=2.7) 29 3.0
SB_41513| Best HMM Match : RVT_1 (HMM E-Value=8.9e-21) 29 3.9
SB_6285| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.9
SB_55351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_49855| Best HMM Match : FBA_2 (HMM E-Value=6.2) 29 3.9
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_39470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_20143| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_18269| Best HMM Match : CUB (HMM E-Value=7.4e-37) 28 9.0
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 28 9.0
SB_16853| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_13938| Best HMM Match : Robl_LC7 (HMM E-Value=2.5e-17)
Length = 111
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 128 KMPKEFKEQVIKTVTRIEESHNVVGVLYLSKDAVQMYT-LPETVAQVLCRNLPPLNASMQ 304
K+ E +Q + + RIE NV GVL ++ + ++T L T + PL +
Sbjct: 3 KLRAEQLKQTMDRIHRIEGHTNVSGVLVINTKGLILHTSLDTTQTTAYTQQCVPLVELAR 62
Query: 305 RAVTEIDIEDTLVAYRIETKTSEVLVASDLDFTACVVHR 421
+ + D ED L +R+ T E+++A + +T V+ +
Sbjct: 63 ATIRDTDPEDDLRFFRVRTLKHELIIAPEDKYTLIVIQK 101
>SB_53948| Best HMM Match : Robl_LC7 (HMM E-Value=9.3e-25)
Length = 101
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 149 EQVIKTVTRIEESHNVVGVLYLSKDAVQMY-TLPETVAQVLCRNLPPLNASMQRAVTEID 325
++V + + RI V G + + + V + T+ + Q+ N+ + + AV ++D
Sbjct: 5 DEVEEVLKRIINHPGVTGSIITNPEGVAIRSTMDNSTTQIYLSNIQSMTQMARSAVRDLD 64
Query: 326 IEDTLVAYRIETKTSEVLVASDLDFTACVVHRIKRK 433
+ L RI ++ E+LVA + D+T V+ K
Sbjct: 65 PLNDLKFLRIRSRKYEILVAPENDYTLIVIQSYDAK 100
>SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 35.1 bits (77), Expect = 0.060
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +2
Query: 554 NINPVIDRIMEDESVEGVIMTNKDGCPIMTNVNAAGATNY 673
++ ++DRI + + V G+I+ N+DG PI + ++ + Y
Sbjct: 264 HVEQILDRIQQQKGVTGLIIVNQDGMPIRSTLDNSSTLQY 303
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 34.7 bits (76), Expect = 0.079
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 74 QHFLLSMSIQYKKKINKCKMPKEFKEQVIKT-VTRIEESHNVVGVLYLSKDAVQMYTLPE 250
+ +L + + K+ K K+P E K + +K +++ + N +K A++
Sbjct: 913 ERLVLQIEQDFLGKLEKAKVPLEDKIRELKEELSKAKREQNT------AKSALEQEKAD- 965
Query: 251 TVAQVLCRNLPPLNASMQRAVTEIDIEDTLVAYRIETKTSEVLVASDLDFTA 406
+ Q + R + A +QRA EI+ + L+A +ETK + + V SDLD A
Sbjct: 966 -LQQEVDRVNDNMKAKLQRAKDEIERQADLIAL-LETKNNSIPVVSDLDIQA 1015
>SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082)
Length = 363
Score = 34.7 bits (76), Expect = 0.079
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 74 QHFLLSMSIQYKKKINKCKMPKEFKEQVIKT-VTRIEESHNVVGVLYLSKDAVQMYTLPE 250
+ +L + + K+ K K+P E K + +K +++ + N +K A++
Sbjct: 193 ERLVLQIEQDFLGKLEKAKVPLEDKIRELKEELSKAKREQNT------AKSALEQEKAD- 245
Query: 251 TVAQVLCRNLPPLNASMQRAVTEIDIEDTLVAYRIETKTSEVLVASDLDFTA 406
+ Q + R + A +QRA EI+ + L+A +ETK + + V SDLD A
Sbjct: 246 -LQQEVDRVNDNMKAKLQRAKDEIERQADLIAL-LETKNNSIPVVSDLDIQA 295
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 216 QKTQSKCTHCQKRSRRSYAETCHRSTRVCNEP 311
+K KC +C K + SYA T H+ T ++P
Sbjct: 560 EKRPFKCPNCSKAFKTSYALTSHQVTHSASKP 591
>SB_59180| Best HMM Match : FtsX (HMM E-Value=2.7)
Length = 228
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 44 FINFVFYEIFQHFLLSMSIQYKKKINKCKMPKEFKEQVIKTVTRI--EESHNVVGVL 208
F F F I F ++ +KKK+ + ++ E K + I T+ + E SH + ++
Sbjct: 171 FAFFAFMIIVALFFYKSNLAHKKKVKEAEVINELKREDIVTIHEVINESSHQISKII 227
>SB_41513| Best HMM Match : RVT_1 (HMM E-Value=8.9e-21)
Length = 1080
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 219 KTQSKCTHCQKRSRRSYAETCHRSTRVCNE-PLLKSISKTRWSRIESK 359
K++ +C C++++ RS + C + CN +++ +K+++ R E K
Sbjct: 1012 KSEVECYRCRRKAHRSSDKVCKALGKKCNNCGVVRHFAKSKFCRGEPK 1059
>SB_6285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 47 INFVFYEIFQHFLLSMSIQYKKKINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSKDA 226
++FV E F H + + Y +CK KE +++K + HN+ + K+
Sbjct: 178 LSFVATETFDHAMTFFTFPYVSPEVQCKAVKEM-VRIVKPGGTLYVGHNLESDCF--KNH 234
Query: 227 VQMYTLP 247
+ +YTLP
Sbjct: 235 IGIYTLP 241
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 231 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQ 371
+CTHC ++ + T H+ N+PL + IE ++H+
Sbjct: 685 ECTHCDRKFAHEFLLTRHQLNHSANKPLRCDRCSKVFETIEQLQEHR 731
>SB_55351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 219 KTQSKCTHCQKRSRRSYAETCHRSTRVCNE-PLLKSISKTRWSRIESK 359
K++ +C C++++ RS + C + CN +++ +K+++ R E K
Sbjct: 269 KSEVECYRCRRKAHRSSDKVCKALGKKCNNCGVVRHFAKSKFCRGEPK 316
>SB_49855| Best HMM Match : FBA_2 (HMM E-Value=6.2)
Length = 167
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 524 WLVNLSAKINNINP-VIDRIMEDESVEGVIMTNKDGCPIMTNVNAAGATNYALALHRFGG 700
W++ + K ++ NP +D++ ++ +G + N + P++ + NY AL +
Sbjct: 18 WVIEGNVKFDDDNPEALDQLFWNKKCDGTVKLNLEIFPVLKEIITPKDVNYFEALKMYVM 77
Query: 701 YGTNLRQGN 727
Y N N
Sbjct: 78 YLLNEENRN 86
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/80 (25%), Positives = 41/80 (51%)
Frame = +2
Query: 59 FYEIFQHFLLSMSIQYKKKINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSKDAVQMY 238
F+E Q L+S+S ++ + + + + E+K V + ++ + S N +YL+ + Y
Sbjct: 3151 FHEWPQEALVSVSRRFIEDLEQ--LEAEYKPPVAEFMSYVHTSVNEESQMYLANERRYNY 3208
Query: 239 TLPETVAQVLCRNLPPLNAS 298
T P++ + R P NA+
Sbjct: 3209 TTPKSFLEQCGRLDPGKNAA 3228
>SB_39470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/100 (19%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 65 EIFQHFLLSMSIQYKKKINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSKDAVQMY-- 238
E+ FLL M + + +C M E + +++ +T I + + +Y++ + ++ +
Sbjct: 46 ELRAAFLLVMEVVRLLGLEECSMATECDKHLLRLLTPIAKLYTAKQAIYVASEGLESFGG 105
Query: 239 --TLPETVAQVLCRNLPPLNASMQRAVTEIDIEDTLVAYR 352
+ +T L R+ L+A + +++ D+L + R
Sbjct: 106 QGYIEDTGLPGLLRDAQVLHAFQESVHSKLKAADSLPSLR 145
>SB_20143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 414 TTHAVKSRSDATKTSDVFVSILYATNVSSISISVTARC 301
TT++ KS + KTS+ V+ + N+S+ S+ VT C
Sbjct: 115 TTNSKKSGAKGGKTSNSLVNSQRSVNISTKSLKVTVDC 152
>SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1144
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 414 TTHAVKSRSDATKTSDVFVSILYATNVSSISISVTARC 301
TT++ KS + KTS+ V+ + N+S+ S+ VT C
Sbjct: 115 TTNSKKSGAKGGKTSNSLVNSQRSVNISTKSLKVTVDC 152
>SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1421
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 198 LEFCICQKTQSKCTHCQKRSRRSY--AETCH--RSTRVCNEPLLKSISKTRWSR--IESK 359
L+F +K +S C C+ R + Y E H S V +E ++ + + + SR + +K
Sbjct: 368 LDFVFVRKLRSTCRKCRNRDQDRYKTEEMGHWAESPEVRSEKIILELKRDKRSRKTLVTK 427
Query: 360 RKHQ 371
KHQ
Sbjct: 428 SKHQ 431
>SB_18269| Best HMM Match : CUB (HMM E-Value=7.4e-37)
Length = 1655
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 524 WLVNLSAKINNINPVIDR--IMEDESVEGVIMTN 619
W++ LSA I NI V+ R I ED V ++TN
Sbjct: 1012 WILGLSALIGNIFVVLLRLIIKEDNKVHSYLLTN 1045
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 89 SMSIQYKKKINKCKMPKEFKEQVIKTVTRIEES 187
S +I K+ +C++ F +Q IK V+R EES
Sbjct: 466 STNISTGKEARQCQLGNTFPDQKIKLVSRSEES 498
>SB_16853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 524 WLVNLSAKINNINPVIDR--IMEDESVEGVIMTN 619
W++ LSA I NI V+ R I ED V ++TN
Sbjct: 4 WILGLSALIGNIFVVLLRLIIKEDNKVHSFLLTN 37
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,144,366
Number of Sequences: 59808
Number of extensions: 427618
Number of successful extensions: 1306
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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