Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g12
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.64 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 429 VVWRCCLETEAIVDKFLCYDFIIHIWNLRHGF 334
           +++  C++TE  V  FLC   + +  N  H F
Sbjct: 131 IIYSICVQTEKSVFDFLCRHTVEYFQNYIHFF 162


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 217  VVNLKSGDWQTEDVSLKK 270
            ++NL    W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 217  VVNLKSGDWQTEDVSLKK 270
            ++NL    W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 217  VVNLKSGDWQTEDVSLKK 270
            ++NL    W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 217  VVNLKSGDWQTEDVSLKK 270
            ++NL    W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 411 LETEAIVDKFLCYDFIIHIWNLRHGF 334
           L   A++  F  Y F++ +  L+H F
Sbjct: 178 LFVSALIKAFSKYQFVVLVLQLQHRF 203


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 411 LETEAIVDKFLCYDFIIHIWNLRHGF 334
           L   A++  F  Y F++ +  L+H F
Sbjct: 178 LFVSALIKAFSKYQFVVLVLQLQHRF 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,925
Number of Sequences: 336
Number of extensions: 3611
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)