Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g08
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8T3J9 Cluster: AT11889p; n=3; Sophophora|Rep: AT11889p...    85   1e-15
UniRef50_Q17IZ7 Cluster: M12 mutant protein, putative; n=1; Aede...    66   5e-10
UniRef50_A3EP79 Cluster: Putative GTP binding protein; n=1; Lept...    33   6.0  
UniRef50_A4VR28 Cluster: Lipoprotein, putative; n=13; Pseudomona...    33   7.9  
UniRef50_A3M465 Cluster: TPR domain protein; n=1; Acinetobacter ...    33   7.9  
UniRef50_A0D2I9 Cluster: Chromosome undetermined scaffold_35, wh...    33   7.9  
UniRef50_Q6FX13 Cluster: Similar to sp|P40480 Saccharomyces cere...    33   7.9  
UniRef50_Q4P3M6 Cluster: Putative uncharacterized protein; n=2; ...    33   7.9  

>UniRef50_Q8T3J9 Cluster: AT11889p; n=3; Sophophora|Rep: AT11889p -
           Drosophila melanogaster (Fruit fly)
          Length = 441

 Score = 85.0 bits (201), Expect = 1e-15
 Identities = 44/112 (39%), Positives = 68/112 (60%)
 Frame = +2

Query: 287 PNLPRWWQAKVIQYAFAHPHVRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKR 466
           P+  +WW+   +  AF  P + ARLE+ MG+N+V+LTD++YM EL ERI     + L  R
Sbjct: 36  PSNKKWWEDPDVIVAFNLPRISARLERLMGTNVVKLTDRSYMKELRERIDEDYRKQLLSR 95

Query: 467 ISSRVLDEMERLKRLILVGKTPLKECPPELFHHPVFVFWRMVNREVARASKK 622
           I +R L E+ER + LI+ GK+ +   P EL + P+F+  +  N E+ +   K
Sbjct: 96  IRARELKEVERERMLIIEGKSDV--IPDELANDPIFMVNKDANMEIQKERSK 145


>UniRef50_Q17IZ7 Cluster: M12 mutant protein, putative; n=1; Aedes
           aegypti|Rep: M12 mutant protein, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 317

 Score = 66.5 bits (155), Expect = 5e-10
 Identities = 39/94 (41%), Positives = 52/94 (55%)
 Frame = +2

Query: 341 PHVRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMERLKRLILV 520
           P V A+LEK MG+N+VRLTD+ YM EL+ RI+      L KRIS R   E+ER + LIL 
Sbjct: 10  PRVTAQLEKLMGTNVVRLTDRKYMQELQRRIQQDYNVTLEKRISEREAKELERERNLILS 69

Query: 521 GKTPLKECPPELFHHPVFVFWRMVNREVARASKK 622
           G     +  PE     VF   +  N+ +    +K
Sbjct: 70  G---AGDSIPEDMSSSVFTVNKKTNQHICNKREK 100


>UniRef50_A3EP79 Cluster: Putative GTP binding protein; n=1;
           Leptospirillum sp. Group II UBA|Rep: Putative GTP
           binding protein - Leptospirillum sp. Group II UBA
          Length = 518

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 28/79 (35%), Positives = 38/79 (48%)
 Frame = +2

Query: 296 PRWWQAKVIQYAFAHPHVRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISS 475
           PR  Q      A   P  +A L   + +NL R+T +N   E  ERIR++ EE    R SS
Sbjct: 86  PRLPQVDSFSLATLDPDPKAPLPWTLEANL-RVTPRNL--EGHERIRSIEEEMRRVRTSS 142

Query: 476 RVLDEMERLKRLILVGKTP 532
           R    +   +R ILV  +P
Sbjct: 143 R--HHLSERERAILVSASP 159


>UniRef50_A4VR28 Cluster: Lipoprotein, putative; n=13;
           Pseudomonadaceae|Rep: Lipoprotein, putative -
           Pseudomonas stutzeri (strain A1501)
          Length = 238

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 24/67 (35%), Positives = 37/67 (55%)
 Frame = +2

Query: 347 VRARLEKHMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMERLKRLILVGK 526
           +R +  KH+GS LVRL +++  T  ++ +RA  +  L +R+S  V   +E      LV K
Sbjct: 148 LRDKAGKHLGSRLVRLQEEHLGTTADQ-VRA--QSALLQRLSEMVAGAVEP----ALVAK 200

Query: 527 TPLKECP 547
           TP K  P
Sbjct: 201 TPPKPAP 207


>UniRef50_A3M465 Cluster: TPR domain protein; n=1; Acinetobacter
           baumannii ATCC 17978|Rep: TPR domain protein -
           Acinetobacter baumannii (strain ATCC 17978 / NCDC KC
           755)
          Length = 392

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +2

Query: 368 HMGSNLVRLTDKNYMTELEERIRAVNEENLNKRISSRVLDEMERLKRLILVG 523
           ++  +L++L +K+   ++ E I  +NE N N  +SS    ++  ++ LIL G
Sbjct: 254 YIRKDLLKLKEKSNNQDISELIAKLNESNQNNNLSSIEFKQILEIQNLILTG 305


>UniRef50_A0D2I9 Cluster: Chromosome undetermined scaffold_35, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_35,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 219

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +2

Query: 356 RLEKHMGSNLVRLTDKN-YMTELEERIRAVNEENLNKRISSRVL-DEMERLKRLI 514
           RLE+ +     ++ D+N YM ++E+RI  +N EN+N    ++ L  E++  KR +
Sbjct: 83  RLEQQLREAYYQIDDQNEYMKQMEQRIDPLNLENINLIKQNKTLQQELDYYKRSV 137


>UniRef50_Q6FX13 Cluster: Similar to sp|P40480 Saccharomyces
            cerevisiae YIL112w; n=1; Candida glabrata|Rep: Similar to
            sp|P40480 Saccharomyces cerevisiae YIL112w - Candida
            glabrata (Yeast) (Torulopsis glabrata)
          Length = 1110

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
 Frame = +2

Query: 335  AHPHVRARLEKHMGSNLVRLTD---KNYMTELEERIRAVNEENLNKRISSRVLDEMERLK 505
            A  H R + + H+  + V   +   K    E E+R++A  EE + KR+  +   EME L 
Sbjct: 803  ADEHRRPKFQTHLSESQVHKEEEMIKETPEEREKRLKA-EEEYIQKRLQQKKKKEMELLH 861

Query: 506  RLILVGKTPLKECPPELFHHPVFVFWRMVNREVARASKKRADAYYRK 646
            ++ +V +   KE   +           +  +E+  A +K A+   R+
Sbjct: 862  KMEIVQQKREKEKEKQRIEEEKRQEELLKQQEIELAKRKEAEELDRR 908


>UniRef50_Q4P3M6 Cluster: Putative uncharacterized protein; n=2;
            Fungi/Metazoa group|Rep: Putative uncharacterized protein
            - Ustilago maydis (Smut fungus)
          Length = 1249

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +2

Query: 350  RARLEKHMGSN--LVRLTDKNYMTELEE-RIRAVNEENLNKRISSRVLDEMERL 502
            RAR EK+  +N        ++ ++EL E   +A+N E L + +S R  DEMERL
Sbjct: 973  RARFEKYKQTNPSAAGAQFQSLLSELTEAETKALNAERLFQTVSERCKDEMERL 1026


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,344,231
Number of Sequences: 1657284
Number of extensions: 11122659
Number of successful extensions: 33898
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33872
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)