Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g07
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.9  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 551 GPLFLWRQAKALHWL 507
           G + LW QA AL WL
Sbjct: 219 GNMGLWDQALALRWL 233


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 551 GPLFLWRQAKALHWL 507
           G + LW QA AL WL
Sbjct: 219 GNMGLWDQALALRWL 233


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 5   LSEAFFNQDLSSCSASFIKYLP*SIYRFLGV 97
           L +++ + D+  C+AS +     SI R+L V
Sbjct: 110 LCDSWVSLDILLCTASILSLCAISIDRYLAV 140


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 236 PSQSTSLPAASTQKST 189
           P+ STSLPA  T  +T
Sbjct: 97  PASSTSLPATITTTTT 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,366
Number of Sequences: 438
Number of extensions: 4199
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)