Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g07
         (654 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g24255.1 68415.m02897 hypothetical protein                          32   0.38 
At4g15380.1 68417.m02350 cytochrome P450 family protein similar ...    30   1.5  
At1g74110.1 68414.m08583 cytochrome P450 family protein similar ...    29   2.7  
At3g45840.1 68416.m04961 DC1 domain-containing protein contains ...    28   4.7  
At3g13000.2 68416.m01620 expressed protein contains Pfam profile...    28   4.7  
At3g13000.1 68416.m01619 expressed protein contains Pfam profile...    28   4.7  
At3g22730.1 68416.m02867 F-box family protein contains Pfam PF00...    28   6.2  
At1g64950.1 68414.m07362 cytochrome P450, putative similar to cy...    28   6.2  

>At2g24255.1 68415.m02897 hypothetical protein
          Length = 336

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 256 LPYNKETHLHTQPGSDPATLVAGKQSSNQLNQCVEIRMPMSINSNI 393
           +P+ K+ H+H + G  P   +A  Q S+ L   V +++P SI   I
Sbjct: 70  IPFRKQKHVHPREGPSPD--IADDQLSDALQCLVNVKIPASIPKKI 113


>At4g15380.1 68417.m02350 cytochrome P450 family protein similar to
           CYTOCHROME P450 93A3  (P450 CP5) (SP:O81973)  [Glycine
           max]
          Length = 517

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 306 SNPSCGEAIQ*SIKSVCGDSDADVDKLQHPRLVYTEAVVKET 431
           +NP+  E ++  I SV G S   + +   P+L Y +AVVKET
Sbjct: 325 NNPNVLERLRGEIDSVVGKSRL-IQETDLPKLPYLQAVVKET 365


>At1g74110.1 68414.m08583 cytochrome P450 family protein similar to
           Cytochrome P450 78A4 (SP:O65012) Cytochrome P450 78A4
           [Pinus radiata]; similar to cytochrome P-450 GB:AAB37231
           from [Phalaenopsis sp. SM9108]
          Length = 537

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 309 NPSCGEAIQ*SIKSVCGDSDADVDKLQHPRLVYTEAVVKET 431
           +P      Q  I  + GDS   V     P+L Y  A+VKET
Sbjct: 358 HPDIQAKAQAEIDCIVGDSGRQVTDSDLPKLPYVRAIVKET 398


>At3g45840.1 68416.m04961 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 633

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 529 CLHRKRGPPPLLGESSRYATNILARSMIAVL 621
           CL+  R PPPL  +S  Y  N++  S+  VL
Sbjct: 223 CLNCVRSPPPLTAKSLIYVFNVMLWSIEVVL 253


>At3g13000.2 68416.m01620 expressed protein contains Pfam profile
           PF04784: Protein of unknown function, DUF547
          Length = 582

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = -3

Query: 382 LSTSASESPHTD--LIDYWIASPQLGLLDPSQVVYAG-VFLCYTV 257
           LS+SAS  P T+  +I  W+ SPQ+ + + + V+  G VF  Y V
Sbjct: 269 LSSSASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRV 313


>At3g13000.1 68416.m01619 expressed protein contains Pfam profile
           PF04784: Protein of unknown function, DUF547
          Length = 553

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = -3

Query: 382 LSTSASESPHTD--LIDYWIASPQLGLLDPSQVVYAG-VFLCYTV 257
           LS+SAS  P T+  +I  W+ SPQ+ + + + V+  G VF  Y V
Sbjct: 240 LSSSASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRV 284


>At3g22730.1 68416.m02867 F-box family protein contains Pfam
           PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
           protein interaction domain; similar to hypothetical
           protein GB:AAD25583 from [Arabidopsis thaliana]
          Length = 372

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 185 PQYFSEWTLPEA-RCSGLAIQKVLDYRITKKHTCIHNLARIQQP 313
           P Y  E  + EA  C GL +   +DYRI   + C+     I+ P
Sbjct: 90  PPYSEEVDIHEACHCDGLLLCTTMDYRIVVWNPCLGETRWIRWP 133


>At1g64950.1 68414.m07362 cytochrome P450, putative similar to
           cytochrome P450 89A2 (CYPLXXXIX) (SP:Q42602)
           [Arabidopsis thaliana];similar to cytochrome P450
           (GI:438242) [Solanum melongena]
          Length = 510

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 309 NPSCGEAIQ*SIKSVCGDSDADVDKLQHPRLVYTEAVVKE 428
           NP   + +   IKSV G+   +V++    ++ Y EAVV E
Sbjct: 331 NPDIQKRLYEEIKSVVGEEANEVEEEDAQKMPYLEAVVME 370


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,753,036
Number of Sequences: 28952
Number of extensions: 306786
Number of successful extensions: 685
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)