Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10g05
(688 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.17
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.68
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.3
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 8.3
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.1 bits (57), Expect = 0.17
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 489 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 611
++E+L++T + F WN PL++N E I+ + S N++
Sbjct: 149 MIESLSHTTQDLVFIWNMTDPLVVNPE-IELPQLDISNNYT 188
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.68
Identities = 8/24 (33%), Positives = 18/24 (75%)
Frame = +3
Query: 492 LEALANTVETKDFGWNPNSPLLLN 563
+E+L++T + F W+P+ PL+++
Sbjct: 181 MESLSHTTDEMIFQWDPDVPLVVD 204
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.3
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = +1
Query: 478 DKWKYLKPWRTLWKQRILDGIRILLYF 558
D+W ++ W+ L I+ G+ +F
Sbjct: 625 DQWNWVYEWKELIPSHIMAGLLDKFFF 651
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYN 93
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 297 KERSRNRTERERSKEPKIISNNNSLSNNYN 326
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 147 KKRTMDRARRNR--RGRYQSQNNSTADQYN 230
K+R+ +R R R + S NNS ++ YN
Sbjct: 297 KERSRNRTERERSKEPKIISNNNSLSNNYN 326
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 8.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 357 LNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEI 491
L G+T D+S+ ++L + Y DL+ SQ+ + + Q +
Sbjct: 462 LPGVTIQNVDVSQLVTLFTDFYVDLDAVTGHQSQQQQEEQTQSRV 506
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,877
Number of Sequences: 438
Number of extensions: 4413
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -