Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10g03
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    26   0.93 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   2.8  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   2.8  
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       23   6.5  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   8.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.7  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   8.7  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 7/38 (18%), Positives = 25/38 (65%)
 Frame = +3

Query: 198 NGVTAADITKYLQEKFGDVWKVSALVGKAEETLKRSAQ 311
           +G+   ++   L++++GD++++ A +G+A+  +  + +
Sbjct: 62  DGLNLIELHIRLRQEYGDIYRIPAAMGRADVVMSSAPE 99


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 3   STSKITILTVSLIGFHVFFFVIQHLI 80
           S  K+T+    LI  HVFF ++  +I
Sbjct: 271 SGEKVTLSISILISLHVFFLLVVEII 296


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 3   STSKITILTVSLIGFHVFFFVIQHLI 80
           S  K+T+    LI  HVFF ++  +I
Sbjct: 271 SGEKVTLSISILISLHVFFLLVVEII 296


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 101 CNNILYIYQMLDYKKKNMKTN 39
           C +I+Y + +LDY    +KT+
Sbjct: 21  CTHIVYGFAVLDYSTLTIKTH 41


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 285 EETLKRSAQLGFLDKRGERYISK 353
           E+T K SA+L  L K  E+++SK
Sbjct: 346 EQTGKSSAELVRLKKLEEKFVSK 368


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 293  FEEECTAWLLG 325
            FEE+CT W+ G
Sbjct: 2378 FEEKCTRWIEG 2388


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 293  FEEECTAWLLG 325
            FEE+CT W+ G
Sbjct: 2388 FEEKCTRWIEG 2398


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 243 FGDVWKVSALVGKAEETLKRSAQLGFLDK 329
           FGDV   S ++  +  +LKRS    F+D+
Sbjct: 195 FGDVTNGSCVIVASAGSLKRSQLGSFIDE 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,652
Number of Sequences: 2352
Number of extensions: 9982
Number of successful extensions: 52
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)