Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10g01
(769 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 123 1e-28
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 52 5e-07
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 47 2e-05
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 42 7e-04
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 40 0.003
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 39 0.004
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 39 0.005
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 38 0.012
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 36 0.036
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13) 34 0.15
SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0) 33 0.34
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 33 0.34
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 33 0.34
SB_2828| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) 32 0.44
SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05) 32 0.44
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11617| Best HMM Match : TPR_1 (HMM E-Value=0) 31 1.0
SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20) 30 1.8
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 1.8
SB_50860| Best HMM Match : TPR_1 (HMM E-Value=0) 30 2.4
SB_47299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_37363| Best HMM Match : TPR_2 (HMM E-Value=0) 29 4.1
SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0) 29 4.1
SB_21381| Best HMM Match : TPR_1 (HMM E-Value=0) 28 7.2
SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82) 28 9.5
SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0) 28 9.5
SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24) 28 9.5
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 123 bits (297), Expect = 1e-28
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
Frame = +1
Query: 304 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQ----KYDEAINLY 471
+D GVI PD DE MGD + +EAI L+
Sbjct: 13 IDQTGVIEPD-VDEPVPMGDDSIESPLASLVMTFWLSVTGREKSGGSDTLGNLEEAIKLF 71
Query: 472 TAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGK 651
T AI NP SA LFAKR ++++ KPNA I+DC A ++N DSA YK+RGRA+ LG
Sbjct: 72 TDAIMKNPHSAPLFAKRASCFIRMKKPNAAIRDCDKAAQINPDSAQIYKWRGRAHEFLGH 131
Query: 652 FEESSHDLCESLKIDYDDQTNEWLNEVKPNAEKLRQHK 765
+E++ DL ++LK+D+D+Q NEW +V P EK R+ K
Sbjct: 132 WEKADKDLAQALKLDFDEQVNEWFKDVHPKEEKERKRK 169
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +1
Query: 430 AFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAA 609
A S +AI YT AI L+P + + ++ R + KL+K N ++D +E+ D
Sbjct: 19 ALSAGDTQKAIEFYTEAILLDPANHVFYSNRSAAFAKLSKYNEALEDARKCVEIKPDWGK 78
Query: 610 AYKFRGRAYRLLGKFEESSHDLCESLKIDYDD-QTNEWLNEVKPNA 744
Y G AY L ++++ L+ D ++ Q L EV+ NA
Sbjct: 79 GYSRLGTAYSFLKMYQKAEEAFTTGLRHDPNNAQLKSGLEEVQSNA 124
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/87 (20%), Positives = 41/87 (47%)
Frame = +1
Query: 430 AFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAA 609
A+ ++ +D A + A +LNP + + + + CIK+C A+E+ + A
Sbjct: 240 AYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFEEGNYEECIKECLEAVEVGRSNRA 299
Query: 610 AYKFRGRAYRLLGKFEESSHDLCESLK 690
+ G+A+ +G ++ +++K
Sbjct: 300 EFALIGKAFARIGNSYAKQNNYKDAIK 326
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +1
Query: 430 AFSEQKYDEAINLYTAAIQLNPQS----ALLFAKRGQVYLKLNKPNACIKDCTHALELNC 597
AF+ Y +A LYT A++++P++ A L+ R V KL K + I+DCT A+ L+
Sbjct: 43 AFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQAMNLDH 102
Query: 598 DSAAAYKFRGRAYRLLGKFEESSHDLCESL 687
AY R Y K+EE+ D ESL
Sbjct: 103 TYTKAYLKRANCYMESEKYEEAVRDY-ESL 131
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +1
Query: 430 AFSEQKYDEAINLYTAAIQLNPQS----ALLFAKRGQVYLKLNKPNACIKDCTHALELNC 597
AF+ Y +A LYT A++++P++ A L+ R V KL K + I+DCT A+ L+
Sbjct: 43 AFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQAMNLDH 102
Query: 598 DSAAAYKFRGRAYRLLGKFEESSHDLCESL 687
AY R Y K+EE+ D ESL
Sbjct: 103 TYTKAYLKRANCYMESEKYEEAVRDY-ESL 131
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Frame = +1
Query: 430 AFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAA 609
A +++ EA++ YT I+L LF+ R +LKLNKP + DC L+L
Sbjct: 874 AVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALADCESCLKLEEHFGK 933
Query: 610 AYKFRGRAYRLLGKFE-ESSH----DLCESLKIDYDDQT 711
A + + A L + + H LC + Y D+T
Sbjct: 934 ALQRKAWALHELSRLHPDDKHIQGRSLCAASLAQYFDRT 972
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAA 612
F +++Y +A++ Y+ A++L P R + YLKL K +A +D ALE + D
Sbjct: 27 FKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALEEDKDFNKG 86
Query: 613 YKFRGRAYRLLGKFE 657
+ A +G FE
Sbjct: 87 LYQKAEALYAMGDFE 101
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/80 (32%), Positives = 34/80 (42%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAA 612
F E Y+ AI YT AI+L + R YLK + D A++L+
Sbjct: 198 FKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADANKAIQLDRKYIKG 257
Query: 613 YKFRGRAYRLLGKFEESSHD 672
Y R A LGKF+ S D
Sbjct: 258 YYRRATANMALGKFKLSLKD 277
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQL----------NPQSALLFAKRGQVYLKLNKPNACIKDCTHA 582
F Y+ A++ Y AA++L + A+++ R LKL K A IKD T A
Sbjct: 20 FKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQLKLEKYEAAIKDATKA 79
Query: 583 LELNCDSAAAYKFRGRAYRLLGKFEESSHD 672
L++ + A R +A+ G+ EE+ D
Sbjct: 80 LDIVPNDPKALFRRSQAFEATGRLEEAFKD 109
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 457 AINLYTAAIQLNPQSAL-LFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRA 633
A++ +T AI L+P+ A + +RG+ Y KL KP ++D T L + A R
Sbjct: 627 AVSYFTLAIILSPKQAWEAYHQRGKRYFKLKKPRHALQDFTAVLSMRPKHIEALCGRAVI 686
Query: 634 YRLLGKFEESSHDLCESLKID 696
K++E+ D +LKI+
Sbjct: 687 NLTACKYQEAVGDFLAALKIN 707
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +1
Query: 448 YDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRG 627
Y AI L+T AI+L+ + F R + +L + ++D A+ L D + RG
Sbjct: 285 YQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAISLAPDWPKGFFRRG 344
Query: 628 RAYRLLGKFEESSHDLCESLKID 696
RA L F ++ LK+D
Sbjct: 345 RALAGLKLFSDAEGAFAHVLKLD 367
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/107 (25%), Positives = 54/107 (50%)
Frame = +1
Query: 430 AFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAA 609
A S+ + +A+ LY+ AI+L+P + +L+ R ++ + ++D A ELN
Sbjct: 32 ACSKGDFQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQLEQALEDGKKAAELNPLWPK 91
Query: 610 AYKFRGRAYRLLGKFEESSHDLCESLKIDYDDQTNEWLNEVKPNAEK 750
A+ +G A + +G+ E+ +L D+++ + LN + A K
Sbjct: 92 AHYRQGVALQCMGRHAEALAAFATALA--QDEKSPQLLNTLLDAALK 136
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 499 SALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEESSHDLC 678
S + KRG+ Y L N I+D L + +AY + +AYR LG +++ +L
Sbjct: 838 SGRAYGKRGECYHLLGDSNEAIRDYEKYLAAAQQAESAYD-QDKAYRGLGVALKTTGNLQ 896
Query: 679 ESL 687
++L
Sbjct: 897 QAL 899
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 532 YLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKID 696
+LKL CIK C AL+++ ++ A RG+A L +E+S D + L++D
Sbjct: 1028 HLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDFTQVLELD 1082
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +1
Query: 442 QKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKF 621
++Y AI+LY +I +P + + +R ++ LNK + D ++LN Y F
Sbjct: 298 KEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLDFEECIKLNPKWVKGYLF 357
Query: 622 RGRAYRLLGKFEES 663
RG + L +++++
Sbjct: 358 RGLSQLHLRQYKDA 371
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 35.9 bits (79), Expect = 0.036
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +1
Query: 424 MRAFSEQKYDEAINLYTAAIQL------NPQSAL--LFAKRGQVYLKLNKPNACIKDCTH 579
MR + +Y EA+ Y+ AI + + +SAL L R ++ + C+KDCT
Sbjct: 423 MRLYKIGRYAEAVEKYSQAIDVLWKDKSHFKSALASLLYNRASCLGRIGDASGCVKDCTS 482
Query: 580 ALELNCDSAAAYKFRGRAYRLLGK 651
+L L DS A+ R + L K
Sbjct: 483 SLNLIPDSLKAHLKRAEQFEHLEK 506
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 565 KDCTHALELNCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKID 696
KD AL L D+ A R A + LGK++ ++ DL +KID
Sbjct: 771 KDANTALGLQPDNVKALYRRALARKALGKYDTAAKDLLSLVKID 814
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 430 AFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNK 549
AF +QKY+EA+ LYT A+ + + + R Q+ K K
Sbjct: 130 AFKQQKYEEAVKLYTQALNQDRTNTAFYTNRAQLDKKCIK 169
>SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13)
Length = 452
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 469 YTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLG 648
+TAA+ L P+SA F RG + KP + D + + A + Y LG
Sbjct: 221 FTAALLLEPRSAETFHLRGMLQYMNGKPALALNDFKACQSFDPQNTACLYMKAVCYATLG 280
Query: 649 KFEES 663
F E+
Sbjct: 281 NFYET 285
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +1
Query: 451 DEAINLYTAAIQLNPQSALLFAKRGQVYLKLN---KPN--ACIKDCTHALELNCDSAAAY 615
D+AI+ +T I+ +P+ F RG Y+K K N A I D + + + + +
Sbjct: 67 DDAISYFTKIIKEHPKVTSAFLGRGTAYVKKGIQIKENSDAAISDFSTVISHSPKNPEGW 126
Query: 616 KFRGRAYRLLGKFEESSHDLCESLKI 693
R +G+ E+ D+ +L +
Sbjct: 127 IRRAEVLSPIGRIPEAIKDISVALSL 152
>SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 1161
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELN------ 594
F++ KY++A+N Y A+ L ++ + GQ + K + + H L L
Sbjct: 198 FNQGKYEDAMNNYQQALSLFQKTG---DESGQANATMAKYEDAMNNYQHVLSLFQKTGDV 254
Query: 595 CDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
A AY G YR GK+E++ ++ +L +
Sbjct: 255 SGQAKAYHGMGNVYRSHGKYEDAMNNYQHALSL 287
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 535 LKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEES 663
LKL + + I+DC AL+L+ +SA A RG+A + +EE+
Sbjct: 51 LKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEA 93
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 535 LKLNKPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEES 663
LKL + + I+DC AL+L+ +SA A RG+A + +EE+
Sbjct: 378 LKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEA 420
>SB_2828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 32.7 bits (71), Expect = 0.34
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Frame = +1
Query: 445 KYDEAINLYTAAIQLNPQS------ALLFAKRGQVYLKLNKPNACIKDCTHALEL----- 591
KY++A+N+Y A+ L ++ A + + G+V+ K + + HAL L
Sbjct: 277 KYEDAMNIYQHAVSLFQKTGDVSDQANAYLEMGEVHSFQGKYEDAMNNYQHALSLFQKTG 336
Query: 592 -NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI-----DYDDQTNEWL 723
A AY G ++ GK+E++ ++ +L + D DQ N +L
Sbjct: 337 DESGQAYAYLGMGNVHKPQGKYEDAMNNYQHALSLFQKTGDESDQANAYL 386
>SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06)
Length = 357
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQS-----ALLFAKRGQVYLKLNKPNACIKDCTHALELNC 597
F +++ A+ +YT +I + P + +L +A R V + + C++D A ++
Sbjct: 78 FQKRQLGRALEVYTQSILVAPSTDLKVLSLAYANRSAVLFHMKEYELCLRDIEFAQKMKY 137
Query: 598 DSAAAYKF---RGRAYRLLGKFEES 663
YK + R+ + L + EES
Sbjct: 138 PGEMVYKILDRKARSLKALCRIEES 162
>SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05)
Length = 190
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 568 DCTHALELNCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKID 696
DC AL L+ AY RG+A L K ES D E+L+++
Sbjct: 107 DCDLALSLDYSYTKAYLRRGKARSHLNKLHESLSDFKEALRLE 149
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 31.5 bits (68), Expect = 0.77
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +1
Query: 448 YDEAINLYTAAIQLNPQSALLFAK-RGQV---YLKLNKPNACIKDCTHALELNCDSAAAY 615
Y EAI+ A++ ++ L K R Q+ +LKL IK+C AL ++ + A
Sbjct: 98 YHEAIDKLKKALRTESKNKPLVGKARRQLCHCHLKLGFSQEAIKECNAALSIDENDVDAL 157
Query: 616 KFRGRAYRLLGKFEESSHDLCESLKIDYDDQTNEWLNEVKPNAEKLRQ 759
R AY L + E+ +D ++ I NE L++V+ ++ ++
Sbjct: 158 CDRAEAYILEEMYNEAVNDFQKAKSI------NEHLHKVQEGLDRAQR 199
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSAAA 612
F ++ D + + T AI+ NP A ++ G V+ + + + + HA++L D
Sbjct: 92 FQCRRLDRSAHFSTLAIKQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVKLKPDFIDG 151
Query: 613 YKFRGRAYRLLGKFEESSHDLCESLK 690
Y A G E + H +L+
Sbjct: 152 YINLAAALVAAGDLEGAVHAYATALQ 177
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 430 AFSEQ-KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELNCDSA 606
A EQ K EA Y A+QL+P A + + K I+ ALE+ + A
Sbjct: 305 ALKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKREQGKIEESIRLYCKALEIFPEFA 364
Query: 607 AAYKFRGRAYRLLGKFEESSHDLCESLKI 693
AA+ + GK +E+ E+++I
Sbjct: 365 AAHSNLASVLQQQGKLQEALLHYKEAIRI 393
>SB_11617| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 318
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQSA------LLFAKRGQVYLKLNKPNACIKDCTHALEL- 591
F++ KY++A+N Y A+ L ++ + G+V+ K + + HAL L
Sbjct: 166 FNQGKYEDALNNYQHALSLFQKTGDVSGQDKAYLGIGKVHRSQGKYEDTLNNYQHALSLF 225
Query: 592 ------NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
+C A AY G+ +R GK+E++ ++ ++L +
Sbjct: 226 QKTGDESC-QAKAYLGMGKVHRSHGKYEDAMNNYQQALSL 264
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Frame = +1
Query: 436 SEQKYDEAINLYTAAIQLNPQS------ALLFAKRGQVYLKLNKPNACIKDCTHALELNC 597
S+ KY++A+N Y A+ L ++ A + G+V+ K + + HAL L
Sbjct: 127 SQAKYEDALNNYQHALSLFQKTGDESCQAKAYLGMGKVHFNQGKYEDALNNYQHALSLFQ 186
Query: 598 DSA------AAYKFRGRAYRLLGKFEESSHDLCESLKI 693
+ AY G+ +R GK+E++ ++ +L +
Sbjct: 187 KTGDVSGQDKAYLGIGKVHRSQGKYEDTLNNYQHALSL 224
>SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20)
Length = 1195
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 457 AINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELN 594
A++ Y AI++NP A F +RG +KL+ + D AL +N
Sbjct: 1097 ALDAYNEAIKVNPDYAEAFYQRGLTKMKLSHTKG-VHDFNRALAIN 1141
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 424 MRAFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLN 546
M F+ + + A+N +T ++ +PQ + + RG V+ K++
Sbjct: 107 MYRFNNENWTGAVNDFTEILEQDPQDSRAYTYRGTVFAKMD 147
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALELN 594
FS KY EA++ ++ P+ AL++ G+VY KL + + + + A++L+
Sbjct: 1514 FSIDKYQEALHELEDLKKIVPREALVYFLIGKVYKKLGQAHLAQMNFSWAIDLD 1567
>SB_50860| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 933
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Frame = +1
Query: 436 SEQKYDEAINLYTAAIQLNPQS------ALLFAKRGQVYLKLNKPNACIKDCTHALEL-- 591
S+ KY++A+N Y A+ L ++ A + G V+ K + + HAL L
Sbjct: 487 SQGKYEDAMNNYQHALSLFQKTGDESGQAKAYLGMGNVHRSQGKYEDAMNNYQHALSLFQ 546
Query: 592 ----NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
A+AY G + GK+E++ ++ +L +
Sbjct: 547 KTGDESGQASAYHCMGNVHTSQGKYEDAMNNYQHALSL 584
>SB_47299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 445 KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHAL 585
+YD+A++ + AA+ P+ ALL+ + G + + HAL
Sbjct: 223 EYDKAVDCFQAAVIARPEDALLWNRLGATLANGGRSEEAVDAYRHAL 269
>SB_37363| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 936
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Frame = +1
Query: 436 SEQKYDEAINLYTAAIQLNPQS------ALLFAKRGQVYLKLNKPNACIKDCTHALEL-- 591
S+ KY++AIN Y A+ L ++ A + G + K + + HAL L
Sbjct: 389 SQAKYEDAINNYQHALSLFQKTGDESGQASAYLGMGDAHWSQGKYEDAMDNYQHALSLFQ 448
Query: 592 ----NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
AY G A+R GK+E++ ++ +L +
Sbjct: 449 KTGDESGQGDAYLGMGDAHRSQGKYEDAMNNYQHALSL 486
>SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Frame = +1
Query: 436 SEQKYDEAINLYTAAIQLNPQS------ALLFAKRGQVYLKLNKPNACIKDCTHALEL-- 591
S+ KY++AIN Y A+ L ++ A + G + K + + HAL L
Sbjct: 360 SQAKYEDAINNYQHALSLFQKTGDESGQASAYLGMGDAHWSQGKYEDAMDNYQHALSLFQ 419
Query: 592 ----NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
AY G A+R GK+E++ ++ +L +
Sbjct: 420 KTGDESGQGDAYLGMGDAHRSQGKYEDAMNNYQHALSL 457
>SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1106
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQS------ALLFAKRGQVYLKLNKPNACIKDCTHALEL- 591
F++ KY++A+N Y A+ L ++ A + G V++ K + + HAL L
Sbjct: 166 FNQGKYEDALNNYQHALSLFQKTGDESGQASAYHGMGDVHMFQAKYEDAMNNYQHALSLF 225
Query: 592 -----NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
A AY G + GK+E+ ++ +L +
Sbjct: 226 QKTGDESGQAIAYLSMGEVHMFQGKYEDVMNNYQHALSL 264
>SB_21381| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 316
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQSA------LLFAKRGQVYLKLNKPNACIKDCTHALEL- 591
F + KY++A+N Y A+ L ++ + G+V+ K + + H L L
Sbjct: 213 FYQGKYEDALNNYQHALSLFQKTGDVSGQDKAYLGIGKVHRSQGKYEDTLNNYQHTLSLF 272
Query: 592 ------NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
+C A AY G+ +R GK+E++ ++ ++L +
Sbjct: 273 QKTGDESC-QAKAYLGMGKVHRSHGKYEDAMNNYQQALSL 311
>SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82)
Length = 1642
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 547 KPNACIKDCTHALELNCDSAAAYKFRGRAYRLLGKFEESSHD 672
K + IKDC E C+S+A F ++ G F+++ D
Sbjct: 1185 KQSKDIKDCMVGNEETCESSAVENFERKSCNSDGDFDDADRD 1226
>SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 635
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Frame = +1
Query: 433 FSEQKYDEAINLYTAAIQLNPQS------ALLFAKRGQVYLKLNKPNACIKDCTHALEL- 591
F++ KY++A+N Y A+ L ++ + G V+ K + + HAL L
Sbjct: 309 FNQGKYEDALNNYQHALSLFQKTGDESGQGDAYHGMGGVHKSQGKYEDALNNYQHALSLF 368
Query: 592 -----NCDSAAAYKFRGRAYRLLGKFEESSHDLCESLKI 693
C A AY G ++ K+E+ ++ +L +
Sbjct: 369 QKTDDECGQAKAYLGMGGVHKSQAKYEDELNNYQHALSL 407
>SB_47521| Best HMM Match : RVT_1 (HMM E-Value=7.2e-24)
Length = 338
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 571 CTHALELNCDSAAAYKFRGRAYRLLGKFEESSHDL 675
CT L N ++ YK+ G + +G F + DL
Sbjct: 204 CTKYLGQNLENVTTYKYLGLTFSSIGNFNAAKSDL 238
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,256,827
Number of Sequences: 59808
Number of extensions: 413284
Number of successful extensions: 991
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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