Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f24
         (507 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16KV3 Cluster: Putative uncharacterized protein; n=1; ...    33   2.8  
UniRef50_Q6LFG7 Cluster: Putative uncharacterized protein; n=2; ...    32   8.6  

>UniRef50_Q16KV3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 190

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +3

Query: 48  KMPFQRPASVPIGQVWSRF--KGKERDGK 128
           KM ++RPA VP  +VW RF  KG + DG+
Sbjct: 132 KMVWKRPAEVPYPKVWHRFQAKGSQEDGQ 160


>UniRef50_Q6LFG7 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2017

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -2

Query: 419 YRRGIYVWNICKKYNDKKNFFSYLNVVII 333
           + + IYV+NICK+ N++   +SY   V+I
Sbjct: 626 FLKNIYVYNICKRKNEENYSYSYQEKVLI 654


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,798,509
Number of Sequences: 1657284
Number of extensions: 8908315
Number of successful extensions: 17057
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17055
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)