Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f21
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.31 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.7  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   8.8  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   8.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +3

Query: 297  EQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATGA 473
            ++ ERL+    V  + E      D+ +     AKE +  K  +     P+  AET  G+
Sbjct: 871  DEEERLENHTSVKIKREAEDRDEDERSFHSNGAKEEDEDKPSVSPLTSPRQPAETHAGS 929


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 396 KESEARKQLLKEKLMPQPGAETATGAADPELE 491
           K S  RKQL+ E        ++AT +  P+LE
Sbjct: 205 KSSAKRKQLVSEHPDSPNSKKSATPSPPPQLE 236


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 448 PEPRRLPAPRTRNSKGRTRLLTPCQELRYCGRTTCRV 558
           P P  LPA ++R       + +  QE+R   R T +V
Sbjct: 75  PAPSELPALKSRKLNNNNVVSSTNQEIRGPKRKTWKV 111


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 29  SFCNNYNA*SCERSSRGHTLPQRQE 103
           S  N Y+A SC+   +    P++QE
Sbjct: 161 SSLNGYSADSCDSKKKKGPTPRQQE 185


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 217 MVYSLFGTSHLWMERF 170
           M Y  FGT  LW + F
Sbjct: 87  MKYHFFGTLKLWSQLF 102


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 84  PYHNVRKGSDPGCYQLHRPSQCRLKFPIS 170
           P H V K +  G Y+    S   L+ P+S
Sbjct: 268 PPHEVEKRAQDGQYEYRSLSHVSLRPPLS 296


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 209 VHHGPANRWLASSVSAED 262
           V +GP  RW   S   ED
Sbjct: 13  VRYGPTERWQRLSFDDED 30


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 209 VHHGPANRWLASSVSAED 262
           V +GP  RW   S   ED
Sbjct: 13  VRYGPTERWQRLSFDDED 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,286
Number of Sequences: 336
Number of extensions: 3016
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)