Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f21
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 31 0.71
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 2.9
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 2.9
AF039052-3|AAF98627.1| 391|Caenorhabditis elegans Hypothetical ... 29 2.9
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 28 5.0
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 28 5.0
U58753-2|AAC24438.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.6
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 27 8.7
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 8.7
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 31.1 bits (67), Expect = 0.71
Identities = 28/90 (31%), Positives = 42/90 (46%)
Frame = +3
Query: 297 EQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATGAA 476
E+ L K +K T E+LL Q++ K A+++E+R K + PGA T TG +
Sbjct: 26 ERAVALHKNSKEKTNEKLLA----QKSG--KWARDAESRNTW---KCIRAPGAHTHTGES 76
Query: 477 DPELEGPDQTAHTLSRAEILRADNMQGPRL 566
E HT R ++L NM+ L
Sbjct: 77 IKESTETQTVLHTARRRDLLLIFNMENELL 106
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +3
Query: 288 MHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETAT 467
M++++ + L+K+ + T + H +E + Q+ ESE LKE++M + GAE
Sbjct: 368 MNEQKTQDLEKERQYYTMKTSELMDHLKEVSEQRDLTESE-----LKEQMMARLGAEKQL 422
Query: 468 GAADPELE 491
AA+ LE
Sbjct: 423 QAAEKALE 430
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 294 KEQFERLKK-QAKVVTQEELLQAMHDQEAAIQKAA-KESEARKQLLKEKLM 440
KE E++ K A+V +EE A H++E +K KE E KQL KE+ M
Sbjct: 1090 KEDQEKIDKLAAEVKEREEKSLARHEKEEEDEKRRLKEEEDVKQLNKERAM 1140
>Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical
protein F39H11.3 protein.
Length = 588
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 285 IMHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPG-AET 461
+ +K KK+ ++ + Q H Q+ +Q + ++Q++ + M QP +
Sbjct: 361 VFNKYPIPYAKKEQQMTVAPDQAQQQHQQQQ-VQMQQQPQMGQQQMMGQPQMVQPQMGQP 419
Query: 462 ATGAADPELEGPDQTAHTLSRAE 530
G A P + PD H + + +
Sbjct: 420 PMGGAHPGVVAPDGHPHQMMQQQ 442
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 294 KEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATGA 473
K+ E LKK+ + + + +A H+ E ++ E E +++ E + P P A+ T
Sbjct: 1332 KKVKENLKKRIQP-RRGQKEEAAHEPEVVEEQEQVEPEVGPEVVHEPV-PAPAAQLETEP 1389
Query: 474 ADPELEGPDQTAHTLSRA 527
+ ++E PD+ + A
Sbjct: 1390 IEQQIEEPDKVFEPIIEA 1407
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 294 KEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATGA 473
K+ E LKK+ + + + +A H+ E ++ E E +++ E + P P A+ T
Sbjct: 1332 KKVKENLKKRIQP-RRGQKEEAAHEPEVVEEQEQVEPEVGPEVVHEPV-PAPAAQLETEP 1389
Query: 474 ADPELEGPDQTAHTLSRA 527
+ ++E PD+ + A
Sbjct: 1390 IEQQIEEPDKVFEPIIEA 1407
>AF039052-3|AAF98627.1| 391|Caenorhabditis elegans Hypothetical
protein T22D1.5 protein.
Length = 391
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 FERLKKQAKVVTQEELLQAMHDQEAAIQKAAK-ESEARKQLLKEKLMPQPGAETATG 470
FER++ ++V+T+EEL A+ +++ +K E+E ++ E+++ G T TG
Sbjct: 94 FERVRSYSEVITREELQSAIFERKLTETDCSKEEAEMYSIIVTERILWTAG-RTWTG 149
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/82 (20%), Positives = 38/82 (46%)
Frame = +3
Query: 219 VPQIGGWRPLLVPKTEPNFYPAIMHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAK 398
VPQ G P + YP + + Q +++ +Q ++ Q++L Q+ Q+ A+
Sbjct: 350 VPQTYGQSQQPPPTQTYSGYPQNVAQPQPQQIAQQQQLQQQQQLAAEQQKQQQQQQQIAQ 409
Query: 399 ESEARKQLLKEKLMPQPGAETA 464
+ + +Q+ ++ + A A
Sbjct: 410 QQQLAEQIAAQQAQQREAARLA 431
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 188 MRGAEKRVHH--GPANRWLASSVSAEDRTELLSSYHA 292
++G K++H G NRW ++ +EDR EL SS A
Sbjct: 408 VQGGYKKLHDCIGQHNRWELIAMHSEDRCELCSSEKA 444
>Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical
protein C17E4.1 protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +3
Query: 279 PAIMHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAE 458
P+ K Q E +++ K E++ + +A +QK A S K K+ L + E
Sbjct: 140 PSANRKNQVETKREEKKY---EKVKSDLGVPQADVQKNAPPSVFEK---KKALKEESKKE 193
Query: 459 TATGAADPELEGPDQTAHTLSR 524
G+A E+EGP T S+
Sbjct: 194 VLDGSAFEEIEGPSAPVQTGSK 215
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 261 TEPNFYPAIMHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKE-SEARKQLLKEKL 437
T N +PA E+ E K++ +EE A +EA +K +E E +K+ KE
Sbjct: 55 TTANMHPAEPVVEKKEEPKEKVPEKKEEEKKDATKKEEAKEEKKEEERKEEKKEESKEGE 114
Query: 438 MPQPGAETATGAADPELEG 494
G E + + EG
Sbjct: 115 KKNSGEEKKNSGDEKKEEG 133
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 270 NFYPAIMHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARK--QLLKEKLMP 443
N A + K + ++ VT+E+ + + + A++QK++ + + +K +L++E P
Sbjct: 1385 NTRSASVQKSSNQEKTSESGEVTEEDRPPSRNTRSASVQKSSSKVKDQKPEELIEEDRPP 1444
Query: 444 QPGAETA----TGAADP---ELEGPDQTAHTLSRAEILRADNMQGP 560
+A T AA+ E E P ++A +R+ LR D + P
Sbjct: 1445 SRNTRSASAQKTVAANKSVLESEIPSRSASRRTRSTSLRNDTVAEP 1490
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 318 KQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAE 458
+QAK + +EELL+ ++ +KA E RKQ + ++L AE
Sbjct: 1108 EQAKRLREEELLEKQLQEQEIEEKARNEMIERKQKMLQQLEELKEAE 1154
>U58753-2|AAC24438.2| 256|Caenorhabditis elegans Hypothetical
protein W03B1.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 258 KTEPNFYPAIMHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQL 422
KTEPN+ A + + +E + + + T+ E L+ ++ A +ES RKQL
Sbjct: 88 KTEPNYRYAGKYLKTYEAIANKGRDKTKYESLEPA-ISTLSLLDAERESRVRKQL 141
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 294 KEQFERLKKQAKVVTQEELLQAMH-DQEAAIQKAAKESEARKQLLKEKLMPQPGAETATG 470
KE ++LK ++++ T++ + +++A +KAA+ A+KQ K++ + +
Sbjct: 13256 KELNDKLKLESEIATKKASADKLKLEEQAQAKKAAEVEAAKKQKEKDEQLKLDTEAASKK 13315
Query: 471 AADPELE 491
AA +LE
Sbjct: 13316 AAAEKLE 13322
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 294 KEQFERLKKQAKVVTQEELLQAMH-DQEAAIQKAAKESEARKQLLKEKLMPQPGAETATG 470
KE E+ K +A++ ++ + + E+ ++KAA+ A+KQ K++ + +
Sbjct: 13464 KETDEKQKLEAEITAKKSADEKSKLEAESKLKKAAEVEAAKKQKEKDEQLKLDTEAASKK 13523
Query: 471 AADPELEGPDQTAHTLSRAEI 533
AA +LE ++ +H AE+
Sbjct: 13524 AAAEKLE-LEKQSHIKKAAEV 13543
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 294 KEQFERLKKQAKVVTQEELLQAMH-DQEAAIQKAAKESEARKQLLKEKLMPQPGAETATG 470
KE ++LK ++++ T++ + +++A +KAA+ A+KQ K++ + +
Sbjct: 13256 KELNDKLKLESEIATKKASADKLKLEEQAQAKKAAEVEAAKKQKEKDEQLKLDTEAASKK 13315
Query: 471 AADPELE 491
AA +LE
Sbjct: 13316 AAAEKLE 13322
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 294 KEQFERLKKQAKVVTQEELLQAMH-DQEAAIQKAAKESEARKQLLKEKLMPQPGAETATG 470
KE E+ K +A++ ++ + + E+ ++KAA+ A+KQ K++ + +
Sbjct: 13464 KETDEKQKLEAEITAKKSADEKSKLEAESKLKKAAEVEAAKKQKEKDEQLKLDTEAASKK 13523
Query: 471 AADPELEGPDQTAHTLSRAEI 533
AA +LE ++ +H AE+
Sbjct: 13524 AAAEKLE-LEKQSHIKKAAEV 13543
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +3
Query: 288 MHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPG 452
+ K+Q+E L++ +V +++L++ +QK +ESEAR L+++L+ +PG
Sbjct: 18 LEKKQWETLEQ---LVMRDKLIEQCSLHTEILQKDFRESEARIIQLEQQLL-EPG 68
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +3
Query: 288 MHKEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPG 452
+ K+Q+E L++ +V +++L++ +QK +ESEAR L+++L+ +PG
Sbjct: 18 LEKKQWETLEQ---LVMRDKLIEQCSLHTEILQKDFRESEARIIQLEQQLL-EPG 68
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 KEQFERLK-KQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATG 470
KE+ ER+K ++ KV +EE L+A ++ ++ K E + ++ KE+ + AE
Sbjct: 910 KEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERL 969
Query: 471 AADPE 485
A+ E
Sbjct: 970 KAEEE 974
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,355,796
Number of Sequences: 27780
Number of extensions: 298221
Number of successful extensions: 1118
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -