Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f21
         (652 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23040.1 68417.m03322 UBX domain-containing protein similar t...    33   0.22 
At1g73860.1 68414.m08552 kinesin motor protein-related similar t...    32   0.38 
At3g50370.1 68416.m05508 expressed protein                             30   1.2  
At1g22360.1 68414.m02797 UDP-glucoronosyl/UDP-glucosyl transfera...    30   1.2  
At2g42370.1 68415.m05243 expressed protein                             30   1.5  
At3g47910.1 68416.m05224 expressed protein low similarity to non...    29   2.7  
At4g32760.1 68417.m04661 VHS domain-containing protein / GAT dom...    28   4.7  
At5g64870.1 68418.m08160 expressed protein                             28   6.2  
At5g11470.1 68418.m01339 bromo-adjacent homology (BAH) domain-co...    28   6.2  
At2g39440.1 68415.m04841 expressed protein                             28   6.2  
At5g11430.1 68418.m01335 transcription elongation factor-related...    27   8.2  
At3g28770.1 68416.m03591 expressed protein                             27   8.2  
At1g70740.1 68414.m08154 protein kinase family protein contains ...    27   8.2  
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p...    27   8.2  
At1g15720.1 68414.m01886 myb family transcription factor contain...    27   8.2  
At1g11720.1 68414.m01345 starch synthase, putative strong simila...    27   8.2  
At1g09720.1 68414.m01091 kinase interacting family protein simil...    27   8.2  

>At4g23040.1 68417.m03322 UBX domain-containing protein similar to
           Ara4-interacting protein [Arabidopsis thaliana]
           GI:13160609; contains Pfam profile PF00789: UBX domain
          Length = 525

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +3

Query: 294 KEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLL-KEKLMPQPGAETATG 470
           K +  RL+++A  V  E + +A   +E A +K  +E E  +QL+ KE  +PQ        
Sbjct: 389 KAEARRLEEEAARV--EAIEEAKRKEEEARRKVEEEQELERQLVSKEASLPQEPPAGEEN 446

Query: 471 AADPELEGPDQTAH 512
           A   ++  PD T H
Sbjct: 447 AITLQVRLPDGTRH 460


>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
           kinesin-C GB:AAF04841 from [Strongylocentrotus
           purpuratus]
          Length = 1030

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 18/70 (25%), Positives = 36/70 (51%)
 Frame = +3

Query: 294 KEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATGA 473
           + + + L+++ KVV   +   A+ ++   +++  KE+ + K  L+EK+      E  T  
Sbjct: 335 ESRLKELEQEGKVVNTAK--NALEERVKELEQMGKEAHSAKNALEEKIKQLQQMEKETKT 392

Query: 474 ADPELEGPDQ 503
           A+  LEG  Q
Sbjct: 393 ANTSLEGKIQ 402


>At3g50370.1 68416.m05508 expressed protein
          Length = 2179

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/82 (26%), Positives = 37/82 (45%)
 Frame = +3

Query: 294 KEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATGA 473
           +E FE   ++ + + +EE  + + +QE  I+ A  E E R +L +E+   Q   E    A
Sbjct: 466 RESFEAELERVQKMQEEERRRIIEEQERVIELARTEEEERLRLAREQDERQRRLEEE--A 523

Query: 474 ADPELEGPDQTAHTLSRAEILR 539
            +       +      RAE LR
Sbjct: 524 REAAFRNEQERLEATRRAEELR 545


>At1g22360.1 68414.m02797 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 481

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 9/58 (15%)
 Frame = -2

Query: 279 DRSSVRSSALTEDANHRFAGPWCT---LFSAPRI------CGWNALRLGILGGIVRAC 133
           D + V    LT  A+ R    WC    + S P I      CGWN+    + GG+   C
Sbjct: 338 DEAMVPPEFLTATADRRMLASWCPQEKVLSHPAIGGFLTHCGWNSTLESLCGGVPMVC 395


>At2g42370.1 68415.m05243 expressed protein
          Length = 715

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 288 MHKEQFERL-KKQAKVVTQEELLQAMHDQEAAIQKAAKESE 407
           +HKE +E L KK  ++   E  L+ M    A  QKA KES+
Sbjct: 563 LHKESYEELHKKNVEIYKLENELRMMTSVLAWYQKALKESQ 603


>At3g47910.1 68416.m05224 expressed protein low similarity to
            nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
            GI:189036; contains Pfam profiles PF04780: Protein of
            unknown function (DUF629), PF04781: Protein of unknown
            function (DUF627)
          Length = 1290

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
 Frame = +3

Query: 294  KEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLK-EKLMPQPGAETA-T 467
            KE+ E  K+Q ++  +E  L+   + +  I+  AKE    +Q  K    +P   A+T   
Sbjct: 1011 KEEEEEYKRQIELEEEERKLEKTLEYQRRIEDEAKEKHMAEQQKKYSSSVPMNVAKTVYN 1070

Query: 468  GAADPE-----LEGPDQTAHTLSRAEILRADNMQGPRLCNRIILASKCH-AIRD 611
            G  D E     L+G +++ +   R    R D+++G  +    +  S  H AI D
Sbjct: 1071 GCTDNEVDYLVLQGQEKSINQEKRNG--RLDDLEGASVNTNGVFPSTNHSAISD 1122


>At4g32760.1 68417.m04661 VHS domain-containing protein / GAT
           domain-containing protein weak similarity to hepatocyte
           growth factor-regulated tyrosine kinase substrate HRS
           isoform 2 [Homo sapiens] GI:9022389; contains Pfam
           profiles PF00790: VHS domain, PF03127: GAT domain
          Length = 838

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 56  SCERSSRGHTLPQRQERKRP-WLLPTSQALTMPPKIPNLKAFHP 184
           SC     G   PQR ER  P +  P +Q LT  P  PNL+   P
Sbjct: 160 SCPFQRAGAVFPQRSERSAPVFTPPQTQPLTSYP--PNLRNAGP 201


>At5g64870.1 68418.m08160 expressed protein
          Length = 479

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +3

Query: 294 KEQFERLKKQAKVVTQE-ELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETATG 470
           KE+  ++K + KV   E E L A  D   AIQKAA    +R        + +  A  A  
Sbjct: 223 KEEI-KVKTEVKVFQNEKEALVAKADAALAIQKAALSQNSR--------VAEVEAAKAVA 273

Query: 471 AADPELEGPDQTAHTLSRAEILRAD 545
             + EL+   +  + L+R E L+A+
Sbjct: 274 LREAELQTKVEKMNALTRTEKLKAE 298


>At5g11470.1 68418.m01339 bromo-adjacent homology (BAH)
           domain-containing protein contains Pfam profile PF01426:
           BAH domain
          Length = 691

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 378 AIQKAAKESEARKQLLKEKLMP 443
           +I K A+E++ +KQL K+K MP
Sbjct: 315 SISKKAQENDVKKQLTKQKSMP 336


>At2g39440.1 68415.m04841 expressed protein
          Length = 773

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 276 YPAIMHKE-QFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESE 407
           YP  +  E Q E LK +++  +    ++   D+E+A+  A KES+
Sbjct: 562 YPNFLSLENQLETLKSESESYSDGSGMEVSSDEESALDSAIKESK 606


>At5g11430.1 68418.m01335 transcription elongation factor-related
           contains weak similarity to transcription elongation
           factors
          Length = 871

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +3

Query: 327 KVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQP 449
           K+++QE L   MH ++A   ++A +  A+  + K++ +P P
Sbjct: 55  KILSQETLHSLMHGKKATQTESAPQKPAKPVVNKKQHVPPP 95


>At3g28770.1 68416.m03591 expressed protein 
          Length = 2081

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = +3

Query: 306  ERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMPQPGAETAT---GAA 476
            ++ KK+ ++   EE     ++++   Q + +E++ +K+  KEK  P+   +  T   G  
Sbjct: 1189 QQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQSGGK 1248

Query: 477  DPELEGPDQTAHTLSRAE-ILRADNMQGPRLCNRIILA--SKCHAIRDAQIAEKDLIKKE 647
               +E   + A    +++   +AD+ +     N I++   S+  +  D+Q A+ D  K E
Sbjct: 1249 KESMESESKEAENQQKSQATTQADSDESK---NEILMQADSQADSHSDSQ-ADSDESKNE 1304

Query: 648  L 650
            +
Sbjct: 1305 I 1305


>At1g70740.1 68414.m08154 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 425

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 569 QPHHPGV*VSRHQRRSDRGEG 631
           +P HPGV  SR++RR+ R  G
Sbjct: 341 EPDHPGVPGSRYRRRTQRPSG 361


>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
           protein weak similarity to SP|Q00765 Polyposis locus
           protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
           profile PF03134: TB2/DP1, HVA22 family
          Length = 315

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +2

Query: 89  PQRQERKRPWLLPTSQALTMPPKIPNLKAFHPQM 190
           P+ +E+K+P L  TSQA +  P++  L++  PQ+
Sbjct: 161 PEEEEQKQPDLKATSQAASSNPQV-RLQSKKPQL 193


>At1g15720.1 68414.m01886 myb family transcription factor contains
           Pfam PF00249: Myb-like DNA-binding domain
          Length = 390

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 258 KTEPNFYPAIMHKEQFERLKK-QAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEK 434
           K E +   A    E ++++++   +      L Q + +Q A +  ++ ESEARK+ LK K
Sbjct: 140 KWESDLNKAFEEPEIYQKIRETNIRYNAISHLNQLLKEQWALLGCSSLESEARKRFLKRK 199

Query: 435 LMP 443
             P
Sbjct: 200 DSP 202


>At1g11720.1 68414.m01345 starch synthase, putative strong
           similarity to soluble-starch-synthase [Solanum
           tuberosum] GI:1911166
          Length = 1025

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 294 KEQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKESEARKQLLKEKLMP 443
           +EQ +  K++A+   Q+E  + +  Q+AAI+    +++A  Q  +E L P
Sbjct: 239 REQEKLAKEEAERERQKEEKRRIEAQKAAIEADRAQAKAETQKRRELLQP 288


>At1g09720.1 68414.m01091 kinase interacting family protein similar
           to kinase interacting protein 1 (GI:13936326) [Petunia
           integrifolia]
          Length = 928

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 297 EQFERLKKQAKVVTQEELLQAMHDQEAAIQKAAKES 404
           E+ E LKK+ ++  +E+  +A H QE++ + + KES
Sbjct: 289 ERCEALKKKFEIKVEEQAKKAFHGQESSYE-SVKES 323


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,769,926
Number of Sequences: 28952
Number of extensions: 279498
Number of successful extensions: 1042
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)