Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f20
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.27 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   1.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.3  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   5.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   5.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.6  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 16/62 (25%), Positives = 25/62 (40%)
 Frame = +3

Query: 510 ETRRVGNTFVENSENKVLGLRSLVHESLAQPHGLSVKKPHGACSCMMKSPTSFNHQTDPT 689
           E ++     VE+ E  +     L  E    P  + +K  +   S + K+  SFN    P 
Sbjct: 49  ENQKCVKYLVEDEETSLATCNMLCSEPAIWPKPVHIKLTNRESSIIDKTKISFNFSQGPV 108

Query: 690 KI 695
           KI
Sbjct: 109 KI 110


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 300 FDKMLSDEMLSMKQQSHEKDM 362
           FD+ + D  + M +Q H+KD+
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDI 80


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 174 RRVVISEDVSEMIPDFFFKHNSHRKLTTNYTNHRK-PNLKSNVFDKMLSDEMLSM 335
           ++V + ++  EMI    F+ + HR LT  Y +     N++ + F  ++  E + +
Sbjct: 69  KKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHL 123


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +3

Query: 453 LANSGRSENDSQQNNDSQGETRRVG--NTFVENSENK 557
           L    RS+   + N D+ G+T +V   N  +E S N+
Sbjct: 71  LTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASVNE 107


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 363 TYSPSILTWNKASIPTPTLELKQKW 437
           T S +   W+ ASI + TLE  + W
Sbjct: 211 TNSANSSIWSPASIDSFTLEQHRSW 235


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 294 NVFDKMLSDEMLSMKQQSHEK 356
           N++D++LS+ +  MK+   +K
Sbjct: 290 NIYDRVLSELVNKMKEMKMDK 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,158
Number of Sequences: 336
Number of extensions: 3672
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)