Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f20
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB096966-1|BAD23801.1|  112|Homo sapiens uromodulin-like 1 prote...    30   7.2  
BC028703-1|AAH28703.1|  383|Homo sapiens LASS3 protein protein.        30   9.5  

>AB096966-1|BAD23801.1|  112|Homo sapiens uromodulin-like 1 protein
           variant 2 protein.
          Length = 112

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 537 VENSENKVLGLRSLVHESLAQPHGLSVKKPHGACSCMMKSPTSFNHQTDPTKICT 701
           ++  + ++L    L+H  + +  G  +  P G+CS   +SP   N    P+  CT
Sbjct: 19  LQQVDPRLLNHMRLLHSLVGETDGGCLHPPCGSCSGRPRSPAPCNQWPPPSTTCT 73


>BC028703-1|AAH28703.1|  383|Homo sapiens LASS3 protein protein.
          Length = 383

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = -1

Query: 562 NTLFSEFSTKVFPTRL-VSP*ESLFCWLSFSLLPELARNSITGHFCFNSNVGVGILALFH 386
           NTLF  FST  F +RL V P   L+C L   +LP         +     N+ + IL + H
Sbjct: 261 NTLFFIFSTIFFISRLIVFPFWILYCTL---ILPMYHLEPFFSYIFL--NLQLMILQVLH 315

Query: 385 VRIEGLYVMSFS*DCCFIESI 323
            R  G Y++     C F++SI
Sbjct: 316 -RYWGYYILKMLNRCIFMKSI 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,969,177
Number of Sequences: 237096
Number of extensions: 1938723
Number of successful extensions: 3723
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3723
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)