Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f20
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    30   0.019
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   1.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 30.3 bits (65), Expect = 0.019
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 462 SGRSENDSQQNNDSQGETRRVGNTFVENSENK 557
           +G  +ND++QN + Q + +R GN   +N  N+
Sbjct: 496 NGNKQNDNKQNGNRQNDNKRNGNRQNDNQNNQ 527



 Score = 27.1 bits (57), Expect = 0.18
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 462 SGRSENDSQQNNDSQGETRRVGNTFVENSEN 554
           +G  +ND++QN + Q + ++ GN    N +N
Sbjct: 471 NGNRQNDNKQNGNRQNDNKQNGNRQNGNKQN 501



 Score = 26.2 bits (55), Expect = 0.31
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 474 ENDSQQNNDSQGETRRVGNTFVENSEN 554
           +ND++QN + Q + ++ GN   +N +N
Sbjct: 465 QNDNKQNGNRQNDNKQNGNRQNDNKQN 491



 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 462 SGRSENDSQQNNDSQGETRRVGNTFVENSEN 554
           +G  +ND++QN++ Q   R+  N    N +N
Sbjct: 456 NGNRQNDNRQNDNKQNGNRQNDNKQNGNRQN 486



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 462 SGRSENDSQQNNDSQGETRRVGNTFVENSEN 554
           +G  +ND++QN + Q   ++  N    N +N
Sbjct: 481 NGNRQNDNKQNGNRQNGNKQNDNKQNGNRQN 511


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/48 (18%), Positives = 21/48 (43%)
 Frame = +3

Query: 276 KPNLKSNVFDKMLSDEMLSMKQQSHEKDMTYSPSILTWNKASIPTPTL 419
           +P L+ ++++KM+  +  +   +         P  + W +    T TL
Sbjct: 365 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVTKPRYMVWRETISSTATL 412


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/48 (18%), Positives = 21/48 (43%)
 Frame = +3

Query: 276 KPNLKSNVFDKMLSDEMLSMKQQSHEKDMTYSPSILTWNKASIPTPTL 419
           +P L+ ++++KM+  +  +   +         P  + W +    T TL
Sbjct: 280 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVTKPRYMVWRETISSTATL 327


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 171 FHSRC*NVWSLVLKNCVSRL 112
           +H RC   W  +   CVSR+
Sbjct: 17  YHQRCSRDWFRISAGCVSRI 36



 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/48 (18%), Positives = 21/48 (43%)
 Frame = +3

Query: 276 KPNLKSNVFDKMLSDEMLSMKQQSHEKDMTYSPSILTWNKASIPTPTL 419
           +P L+ ++++KM+  +  +   +         P  + W +    T TL
Sbjct: 599 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVTKPRYMVWRETISSTATL 646


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 147 WSLVLKNCVSRLGIL*TLKCETQKS*QTHIIINLN 43
           + + LKN  +R G    L+CE Q      I+ N+N
Sbjct: 779 FEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMN 813


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -1

Query: 616 TDSPWGCANDSCTRLLNPNTLFSEFSTKVFPTRLVSP 506
           +D  W C     TR  N  T  ++      P  +VSP
Sbjct: 527 SDDYWNCVIQYNTRAENHQTGTAKMGPSYDPMAVVSP 563


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,506
Number of Sequences: 438
Number of extensions: 4044
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)