Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f19
         (413 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   3.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.3  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 136  PLSPSSNAFFCV 101
            PL+PSS  FFC+
Sbjct: 973  PLAPSSLFFFCM 984


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 136  PLSPSSNAFFCV 101
            PL+PSS  FFC+
Sbjct: 973  PLAPSSLFFFCM 984


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 151 VFITHPLSPSSNAFFCVNFLKN 86
           +FIT   S  +  FF  NFL N
Sbjct: 232 IFITEHESKPNWLFFLANFLTN 253


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 207 MKLWLQKVGSPKSKIEKAAFRNEGN 281
           +K+W Q   S   K+ KAA  + GN
Sbjct: 165 VKIWFQNRRSKYKKMMKAAQVSGGN 189


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 346 SYLI*IYNHLRISNVLKAQHLIFPSFL 266
           S  I +YN   +SN  ++   +FP+++
Sbjct: 41  SSTIDLYNTSSVSNFNESSSSVFPNYI 67


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 346 SYLI*IYNHLRISNVLKAQHLIFPSFL 266
           S  I +YN   +SN  ++   +FP+++
Sbjct: 41  SSTIDLYNTSSVSNFNESSSSVFPNYI 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,824
Number of Sequences: 336
Number of extensions: 1849
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)