Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f19
         (413 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g03370.1 68418.m00290 acylphosphatase family contains Pfam PF...    54   5e-08
At2g27770.1 68415.m03365 expressed protein                             30   0.71 
At1g37020.1 68414.m04616 Ulp1 protease family protein                  29   0.94 
At2g37930.1 68415.m04656 expressed protein                             28   2.9  
At5g16010.1 68418.m01872 3-oxo-5-alpha-steroid 4-dehydrogenase f...    26   8.7  

>At5g03370.1 68418.m00290 acylphosphatase family contains Pfam
           PF00708: Acylphosphatase
          Length = 171

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 25/57 (43%), Positives = 35/57 (61%)
 Frame = +3

Query: 39  NSVTADFEVFGKVQGVFFRKFTQKKALELGLKGWVMNTAQGTVIGQLQGPSTAVDDM 209
           +S T    + G+VQGV +R +T + A +LG+KGWV N   G+V     GP  AVD+M
Sbjct: 80  SSKTVRVVIKGRVQGVCYRNWTVENAEQLGIKGWVRNRRDGSVEALFSGPPEAVDEM 136


>At2g27770.1 68415.m03365 expressed protein
          Length = 320

 Score = 29.9 bits (64), Expect = 0.71
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 154 AVFITHPLSPSSNAFFCVNFLKNTPCTFPKTSKSAVTLFT 35
           ++ +THPLS SS++  C  +  N  C  P    S  T  T
Sbjct: 12  SINVTHPLSISSSSSSCSKYSTNNVCISPSLIPSIQTSIT 51


>At1g37020.1 68414.m04616 Ulp1 protease family protein
          Length = 611

 Score = 29.5 bits (63), Expect = 0.94
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -1

Query: 110 LLRKLPEEYSLHFSKNFEIRRYTIYFVH 27
           L+RK+  +Y+ H+S +F+   +T Y+V+
Sbjct: 410 LIRKMKNDYNKHYSSDFKTYNWTGYYVN 437


>At2g37930.1 68415.m04656 expressed protein
          Length = 467

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = -2

Query: 220 NQSFMSSTAVEGP*S*PITVPCAVFITHPLSPSSNAFFCVNFLKNTPCTFPKTSKSAV 47
           + S +SST+     S P+T   +V+ TH     SN     N  ++ P   PKT K+ V
Sbjct: 130 SSSSLSSTSHASAKSGPLTFTNSVYTTHSTRTKSNGH---NRTRSGPILKPKTEKNNV 184


>At5g16010.1 68418.m01872 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein similar to steroid 5alpha-reductase - Rattus
           norvegicus, PIR:A34239 [SP|24008]; contains Pfam
           3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544
          Length = 268

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 311 FKCPKSAAFNISLIPERRFLDLRFWASDLL*PKLHVINSSRGSL 180
           +K PK   F+I + P   F  L FW+  L+   ++  + + G++
Sbjct: 192 YKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTM 235


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,139,748
Number of Sequences: 28952
Number of extensions: 152811
Number of successful extensions: 373
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 625471056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)