Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f18
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical pr...    54   9e-08
U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical pr...    54   9e-08
U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical pr...    54   9e-08
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p...    29   3.8  
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p...    29   3.8  
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p...    29   3.8  
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ...    29   3.8  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical ...    28   6.7  

>U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical
           protein C34F11.3a protein.
          Length = 740

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = +1

Query: 316 VPFQRVSVAGIHITGVPIEELIRSATLLVEALGLRRYYMEAAQQSFPETLVEFFSGH 486
           V +QR+++ G  ++GVP+E+L  ++  L+EAL LR  YME     FP T   F SGH
Sbjct: 100 VNYQRMAITGEELSGVPLEDLKTASGHLIEALHLRSKYMERIGNQFPSTTRNFLSGH 156


>U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical
           protein C34F11.3c protein.
          Length = 803

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = +1

Query: 316 VPFQRVSVAGIHITGVPIEELIRSATLLVEALGLRRYYMEAAQQSFPETLVEFFSGH 486
           V +QR+++ G  ++GVP+E+L  ++  L+EAL LR  YME     FP T   F SGH
Sbjct: 163 VNYQRMAITGEELSGVPLEDLKTASGHLIEALHLRSKYMERIGNQFPSTTRNFLSGH 219


>U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical
           protein C34F11.3b protein.
          Length = 764

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = +1

Query: 316 VPFQRVSVAGIHITGVPIEELIRSATLLVEALGLRRYYMEAAQQSFPETLVEFFSGH 486
           V +QR+++ G  ++GVP+E+L  ++  L+EAL LR  YME     FP T   F SGH
Sbjct: 124 VNYQRMAITGEELSGVPLEDLKTASGHLIEALHLRSKYMERIGNQFPSTTRNFLSGH 180


>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
           protein 2, isoform a protein.
          Length = 1538

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 225 RSRPFFIFLMCSEHPECIRYVIIFGFTIYK 136
           R+ P+F+ + C E   C+  VI FGF ++K
Sbjct: 19  RTEPYFMGIFCLE---CVLKVIAFGFALHK 45


>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
           protein 2, isoform c protein.
          Length = 1926

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 225 RSRPFFIFLMCSEHPECIRYVIIFGFTIYK 136
           R+ P+F+ + C E   C+  VI FGF ++K
Sbjct: 19  RTEPYFMGIFCLE---CVLKVIAFGFALHK 45


>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
           protein 2, isoform b protein.
          Length = 2027

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 225 RSRPFFIFLMCSEHPECIRYVIIFGFTIYK 136
           R+ P+F+ + C E   C+  VI FGF ++K
Sbjct: 145 RTEPYFMGIFCLE---CVLKVIAFGFALHK 171


>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
           activated calciumchannel alpha-1 subunit protein.
          Length = 2027

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 225 RSRPFFIFLMCSEHPECIRYVIIFGFTIYK 136
           R+ P+F+ + C E   C+  VI FGF ++K
Sbjct: 145 RTEPYFMGIFCLE---CVLKVIAFGFALHK 171


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 217 SRSRSEANDNAVAATRTHVRGPGDSTRRRADNQVPFQRVSVAGIHITG 360
           S S S+A D++ +AT +   G G+S         P  ++S  G+ +TG
Sbjct: 583 SGSSSQAPDSSQSATNSSNSGSGESKIPNVGPIAPPSQLSQVGVFVTG 630


>AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical
           protein D1037.1 protein.
          Length = 786

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/88 (20%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +1

Query: 130 TKFIYRKTKNYNVSNTFRMFGTHKEYKKWSRSRSEANDNAVAATRTHVRGPGDSTRR-RA 306
           T F+ ++ K ++   + +     +  K WS SRS +   + +  R+  R     +R+ R+
Sbjct: 42  TDFVGKRPKKHHRHKSKKSKKVRRRSKTWSSSRSRSRSRSRSRGRSQERRRSRKSRKSRS 101

Query: 307 DNQVPFQRVSVAGIHITGVPIEELIRSA 390
            +++  +   +   ++   P  ELI  A
Sbjct: 102 RSRLKHREEKIEKKNLEKAPKNELIPQA 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,609,989
Number of Sequences: 27780
Number of extensions: 335916
Number of successful extensions: 1095
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)