Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f17
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g57140.1 68418.m08530 calcineurin-like phosphoesterase family... 29 2.4
At5g56490.1 68418.m07050 FAD-binding domain-containing protein s... 29 2.4
At3g19960.1 68416.m02526 myosin (ATM) nearly identical to myosin... 29 2.4
At1g60140.1 68414.m06775 glycosyl transferase family 20 protein ... 28 4.1
At3g15570.1 68416.m01973 phototropic-responsive NPH3 family prot... 28 5.4
At3g57740.1 68416.m06432 protein kinase family protein contains ... 27 7.2
At2g02220.1 68415.m00159 leucine-rich repeat transmembrane prote... 27 7.2
At1g70570.1 68414.m08125 anthranilate phosphoribosyltransferase,... 27 7.2
At5g06530.2 68418.m00737 ABC transporter family protein 27 9.5
At5g06530.1 68418.m00736 ABC transporter family protein 27 9.5
At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase / sulfite:U... 27 9.5
At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family pr... 27 9.5
At1g19130.1 68414.m02379 expressed protein 27 9.5
>At5g57140.1 68418.m08530 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 Calcineurin-like
phosphoesterase
Length = 397
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 388 WARWSKEYISELQQRTKWRTNQSSLK 465
W R EY+S++ ++ W T+ S LK
Sbjct: 372 WKRLDDEYLSKIDEQVLWETSDSFLK 397
>At5g56490.1 68418.m07050 FAD-binding domain-containing protein
strong similarity to At1g32300, At2g46740, At2g46750,
At2g46760; contains PF01565: FAD binding domain
Length = 577
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 40 LIEEGINFHLCPPYSPHFGGLWEAGVKSIKFHMHRVLGNCNLTYE 174
LIEE F L PY+P++ GL G+ H + G + ++
Sbjct: 129 LIEEAAKFDLALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHD 173
>At3g19960.1 68416.m02526 myosin (ATM) nearly identical to myosin
[Arabidopsis thaliana] GI:6491702; similar to myosin
GI:6491702 from [Arabidopsis thaliana] ;contains Pfam
profiles: PF00063: myosin head (motor domain), PF00612:
IQ calmodulin-binding motif; identical to cDNA myosin
(ATM) GI:297068
Length = 1166
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 305 AVRGWPMRKCPGVSGIMSSGSLDSGVSGREFNIASI 198
A+RGW +R+C G G + SG + G AS+
Sbjct: 921 AIRGWLVRRCSGDIGWLKSGGAKTNELGEVLVKASV 956
>At1g60140.1 68414.m06775 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein contains Pfam
profile: PF02358 trehalose-phosphatase
Length = 861
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 67 LCPPYSPHFG-GLWEAGVKSIKFHMHRVLGNCNL 165
+CP + F GLW+A V + K +V+G NL
Sbjct: 164 MCPDHGERFDRGLWQAYVSANKIFADKVMGVINL 197
>At3g15570.1 68416.m01973 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 452
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 364 LELMRQHFWARWSKEYISELQQRTKWRTNQSSLK 465
L L+R + Y++EL+ R W+ +Q+SLK
Sbjct: 131 LRLLRTAKMVGANPNYLTELETRVSWQLDQASLK 164
>At3g57740.1 68416.m06432 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 357
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 388 WARWSKEYISELQQRTKWRTNQSSLKLHSLVVVKEDNLSPLK 513
W + SK+ SE QR +W + L L+ + +P+K
Sbjct: 4 WRKKSKKKNSEANQRQRWFQENGKVLLEDLIELCNGKSNPIK 45
>At2g02220.1 68415.m00159 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1008
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 156 ISQYSVHMEFNRFNPRLPKT-PKMRRVRWTQVEVNTFFDQ 40
I+ S+ + NRFN RLP+ P +R++ + NTF Q
Sbjct: 316 IALNSLDLGTNRFNGRLPENLPDCKRLKNVNLARNTFHGQ 355
>At1g70570.1 68414.m08125 anthranilate phosphoribosyltransferase,
putative similar to anthranilate
phosphoribosyltransferase (EC 2.4.2.18) SP:O66576 from
[Aquifex aeolicus]
Length = 595
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 314 AGIAVRGWPMRKCPGVSGIMSSGSLDS-GVSGREFNI 207
A A +G+P+ C G + S +L++ GVS + FN+
Sbjct: 466 AASASKGFPVNYCSGFRSLSSDTALEADGVSRQSFNL 502
>At5g06530.2 68418.m00737 ABC transporter family protein
Length = 691
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = -3
Query: 404 FDHLAQKCCRISSNRWNLVRLLSRQSLYSAAGIAVRGWPMRKCPGVSGIMSSGSLDSGVS 225
F HL K + R L + L+R+ A ++ + +C M G+ GVS
Sbjct: 248 FPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDT---MIGGAFVRGVS 304
Query: 224 GREFNIASICVRTVINSS*VKLQFPNT 144
G E SI +IN S + L P +
Sbjct: 305 GGERKRVSIGNEIIINPSLLLLDEPTS 331
>At5g06530.1 68418.m00736 ABC transporter family protein
Length = 751
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = -3
Query: 404 FDHLAQKCCRISSNRWNLVRLLSRQSLYSAAGIAVRGWPMRKCPGVSGIMSSGSLDSGVS 225
F HL K + R L + L+R+ A ++ + +C M G+ GVS
Sbjct: 248 FPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDT---MIGGAFVRGVS 304
Query: 224 GREFNIASICVRTVINSS*VKLQFPNT 144
G E SI +IN S + L P +
Sbjct: 305 GGERKRVSIGNEIIINPSLLLLDEPTS 331
>At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase /
sulfite:UDP-glucose sulfotransferase / sulfolipid
biosynthesis protein (SQD1) identical to gi:2736155
Length = 477
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -3
Query: 278 CPGVSGIMSSGSLDSG---VSGREFNIASICVRTVINSS*VKLQFPNTLCIWNLIDLTPA 108
CP V + SS S +S VSG+ F A + R+ + + + P C++ +
Sbjct: 9 CPSVISLSSSSSKNSVKPFVSGQTFFNAQLLSRSSLKGLLFQEKKPRKSCVFRATAVPIT 68
Query: 107 SQRPPK 90
Q PP+
Sbjct: 69 QQAPPE 74
>At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family
protein
Length = 571
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 145 VLGNCNLTYEELITVLTQIEAILNSRPLTPLSSD 246
V+G+CN+ ++ +T+ + + S+P LS D
Sbjct: 148 VMGHCNMLMDDSVTINMMVADEVESKPYGMLSGD 181
>At1g19130.1 68414.m02379 expressed protein
Length = 187
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 277 HFLIGQPLTAMPAAEYKDCRLSNLTRF-QRL 366
HF +G+PLT + + + + S L RF QR+
Sbjct: 78 HFYLGEPLTVIRSLSTRSLQTSGLVRFLQRM 108
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,406,835
Number of Sequences: 28952
Number of extensions: 271267
Number of successful extensions: 688
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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