Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f15
(501 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 160 5e-40
07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548... 140 8e-34
01_01_0676 + 5194718-5194940,5195420-5195952 32 0.30
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272... 31 0.69
04_03_0647 + 18367321-18367675,18368044-18368885 29 1.6
11_03_0064 + 9518810-9519164,9519533-9520359 29 2.1
08_02_1451 - 27192418-27192423,27192424-27193146 29 2.1
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 29 2.1
05_04_0184 - 18855062-18855604,18855889-18856611 29 2.8
10_07_0179 - 13860745-13861571,13861940-13862294 27 6.4
01_01_0100 - 755894-756662,757086-757598,758718-761050 27 6.4
04_03_0093 - 11085882-11087339 27 8.5
02_05_0933 + 32846658-32846729,32847038-32847133,32847243-328474... 27 8.5
02_01_0244 + 1603381-1603792,1604054-1604132,1604993-1605862,160... 27 8.5
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 160 bits (389), Expect = 5e-40
Identities = 78/135 (57%), Positives = 98/135 (72%)
Frame = +2
Query: 95 DEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDA 274
D++D +P+ ++K VLQE R F+ + RKCS ++TK+LYLLNQGE FT EAT+
Sbjct: 11 DDEDVEYSPFYGIEKGAVLQEARAFHDPQLDARKCSQVITKLLYLLNQGETFTKVEATEV 70
Query: 275 FFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALC 454
FFA TKLFQSK+ LRR+VYL IKELS + +VIIVTSSL KDM K D+YRA AIR LC
Sbjct: 71 FFAVTKLFQSKDAGLRRLVYLMIKELSPSSDEVIIVTSSLMKDMNSKTDMYRANAIRVLC 130
Query: 455 SITDASMLQAIERYM 499
I D ++L IERY+
Sbjct: 131 RIIDGTLLTQIERYL 145
>07_01_0718 +
5484553-5484601,5484836-5484933,5485028-5485078,
5485744-5485857,5485887-5485937,5485938-5486138,
5486240-5486341,5486879-5486986,5487053-5487286,
5488250-5488500,5488592-5488763,5489165-5489320,
5489405-5489455,5489499-5489591,5489814-5490014,
5490105-5490236,5490308-5490481,5490755-5490994,
5491213-5491407
Length = 890
Score = 140 bits (338), Expect = 8e-34
Identities = 80/155 (51%), Positives = 100/155 (64%), Gaps = 17/155 (10%)
Frame = +2
Query: 86 DVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEA 265
D DE++ S P+ ++K VLQE R F+ + R+C ++TK+LYLLNQG+ FT EA
Sbjct: 11 DDLDEEEYYS-PFLGIEKGAVLQEARVFHDPQLDARRCCQVITKLLYLLNQGDTFTKVEA 69
Query: 266 TDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQD-----------------VIIVTSSL 394
T+ FFATTKLFQSK+ LRRMVYL IKELS A + VIIVTSSL
Sbjct: 70 TEVFFATTKLFQSKDAGLRRMVYLMIKELSPSADEFSAVYGSLKVSVLHLLQVIIVTSSL 129
Query: 395 TKDMTGKEDLYRAAAIRALCSITDASMLQAIERYM 499
KDM K D+YRA AIR LC I D+++L IERY+
Sbjct: 130 MKDMNSKTDMYRANAIRVLCRIIDSTLLTQIERYL 164
>01_01_0676 + 5194718-5194940,5195420-5195952
Length = 251
Score = 31.9 bits (69), Expect = 0.30
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
+I F GH + H +HI ++F QF DA + F G+ + + L+G
Sbjct: 7 KISFLGHEIGEGKIHLQEHIAKKFLQFPDAMNDKKELQQFLGIVNYARNHIQNLAKLAGP 66
Query: 247 IFALIQ 230
++A+++
Sbjct: 67 LYAILR 72
>01_06_1795 -
39925019-39926029,39926265-39926408,39927200-39927277,
39927722-39927838,39927925-39927981,39928492-39928623,
39928725-39928922,39929364-39929474,39929570-39929785,
39929879-39930064,39930590-39931192
Length = 950
Score = 30.7 bits (66), Expect = 0.69
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 191 RKCSLILTKILYLLNQGENFTTQEATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQD 370
RK +L +++Y G +A+ K+ + + L+R YL + D
Sbjct: 64 RKMKELLLRLVYAEMLGH-----DASFGHIHAVKMTHDESLPLKRTGYLAVSLFLDERHD 118
Query: 371 -VIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 487
VI+V +++ KD+ L AA+ A C + + A+
Sbjct: 119 LVILVVNTIQKDLRSDNYLVVCAALTAACRLIGEEAIPAV 158
>04_03_0647 + 18367321-18367675,18368044-18368885
Length = 398
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
+I F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KINFLGHKIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 247 IFALIQ*IQYFRKY**TFSRDNERLIKL 164
++A ++ + +KY F+ ++ +L++L
Sbjct: 67 LYAKLR--KNGQKY---FNSEDIKLVRL 89
>11_03_0064 + 9518810-9519164,9519533-9520359
Length = 393
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 247 IFALIQ*IQYFRKY**TFSRDNERLIKL 164
++A ++ + +KY F+ ++ +L++L
Sbjct: 67 LYAKLR--KNGQKY---FNSEDIKLVRL 89
>08_02_1451 - 27192418-27192423,27192424-27193146
Length = 242
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 247 IFALIQ*IQYFRKY**TFSRDNERLIKL 164
++A ++ + +KY F+ ++ +L++L
Sbjct: 67 LYAKLR--KNGQKY---FNSEDIKLVRL 89
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 547 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 606
Query: 247 IFALIQ*IQYFRKY**TFSRDNERLIKL 164
++A ++ + +KY F+ ++ +L++L
Sbjct: 607 LYAKLR--KNGQKY---FNSEDIKLVRL 629
>05_04_0184 - 18855062-18855604,18855889-18856611
Length = 421
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
+I F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 247 IFALIQ 230
++A ++
Sbjct: 67 LYAKLR 72
>10_07_0179 - 13860745-13861571,13861940-13862294
Length = 393
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
++ F GH + H +HI ++ QF DA + F GL + + + L+G
Sbjct: 7 KVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 66
Query: 247 IFALIQ*IQYFRKY**TFSRDNERLIKL 164
++ ++ + +KY F+ ++ +L++L
Sbjct: 67 LYTKLR--KNGQKY---FNSEDIKLVRL 89
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 424 QILFTGHVFSQRGSHY-DHILRQFTQFFDAKINHTSQHDFFGLKQFCCRKESVRSLLSGE 248
+I F GH + H +HI ++ +F DA + F GL + + + L+G
Sbjct: 969 KINFLGHEIGEGKIHLQEHIAKKILEFPDAMNDKKKLQQFLGLVNYARNHINNLAKLAGP 1028
Query: 247 IFALIQ 230
++A ++
Sbjct: 1029 LYAKLR 1034
>04_03_0093 - 11085882-11087339
Length = 485
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 480 CSIEASVMLHNXXXXXARYRSSLPVMSLVKEEVTMITSCANLLS 349
C A V+LH RY+ LP E MI C N+L+
Sbjct: 231 CHNAAHVVLHTQRLRTLRYKDGLP----AGENFLMIADCTNVLA 270
>02_05_0933 +
32846658-32846729,32847038-32847133,32847243-32847411,
32847608-32847669,32848364-32849320,32850036-32850119,
32850307-32850595,32850645-32850694
Length = 592
Score = 27.1 bits (57), Expect = 8.5
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 104 DNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLN--QGENFTTQEATDAF 277
D + Q LD + N ++V+P CS + + L LN QG N Q+ +A
Sbjct: 119 DTADVQTQKLDAGLEEDRLCTLNDSIVLPSNCSAVHDQQLDKLNTEQGANIIAQQ-DNAS 177
Query: 278 FATTKLFQSKEIML-RRMVYLCIKELSKLA--QDVIIVTSSL 394
TTK ++ + C K +++ + Q V VTSS+
Sbjct: 178 TETTKSTVLNDLSSDKEKADACSKPVNEASAGQSVSGVTSSV 219
>02_01_0244 +
1603381-1603792,1604054-1604132,1604993-1605862,
1606019-1606276,1606675-1606834
Length = 592
Score = 27.1 bits (57), Expect = 8.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 92 KDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGE 244
K ED+ S+ P NL+ L R++ T I CS I+ K L+N E
Sbjct: 355 KSEDNPSNVPSGNLEMQAKLDTQRDYKLTKSISLGCSFIV-KASNLVNDVE 404
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,604,836
Number of Sequences: 37544
Number of extensions: 172952
Number of successful extensions: 399
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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