BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f15
(501 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p pro... 216 1e-56
AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer pro... 212 3e-55
AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA... 212 3e-55
BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p pro... 207 6e-54
AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB... 207 6e-54
BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p pro... 38 0.006
AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protei... 38 0.006
AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein. 38 0.006
AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA... 38 0.006
L31852-1|AAA21090.1| 962|Drosophila melanogaster bcop protein. 32 0.50
AF145656-1|AAD38631.1| 964|Drosophila melanogaster BcDNA.GH0931... 32 0.50
AE014298-2708|AAF48830.2| 964|Drosophila melanogaster CG6223-PA... 32 0.50
AY070711-1|AAL48182.1| 687|Drosophila melanogaster SD04925p pro... 28 8.2
AE014297-1538|AAF54829.1| 687|Drosophila melanogaster CG5608-PA... 28 8.2
AE014296-13|AAF47333.2| 480|Drosophila melanogaster CG6845-PA, ... 28 8.2
>AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p
protein.
Length = 878
Score = 216 bits (528), Expect = 1e-56
Identities = 106/139 (76%), Positives = 119/139 (85%)
Frame = +2
Query: 83 RDVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQE 262
R+ DE+D SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +E
Sbjct: 6 REKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVARE 65
Query: 263 ATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAI 442
ATD FFA TKLFQSK+++LRRMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAI
Sbjct: 66 ATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAI 125
Query: 443 RALCSITDASMLQAIERYM 499
RALCSITD +MLQA+ERYM
Sbjct: 126 RALCSITDNTMLQAVERYM 144
>AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer
protein gamma subunit protein.
Length = 879
Score = 212 bits (517), Expect = 3e-55
Identities = 106/140 (75%), Positives = 119/140 (85%), Gaps = 1/140 (0%)
Frame = +2
Query: 83 RDVKDEDD-NSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQ 259
R+ DE+D SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 260 EATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAA 439
EATD FFA TKLFQSK+++LRRMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 440 IRALCSITDASMLQAIERYM 499
IRALCSITD +MLQA+ERYM
Sbjct: 126 IRALCSITDNTMLQAVERYM 145
>AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA,
isoform A protein.
Length = 879
Score = 212 bits (517), Expect = 3e-55
Identities = 106/140 (75%), Positives = 119/140 (85%), Gaps = 1/140 (0%)
Frame = +2
Query: 83 RDVKDEDD-NSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQ 259
R+ DE+D SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 260 EATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAA 439
EATD FFA TKLFQSK+++LRRMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAA
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 125
Query: 440 IRALCSITDASMLQAIERYM 499
IRALCSITD +MLQA+ERYM
Sbjct: 126 IRALCSITDNTMLQAVERYM 145
>BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p
protein.
Length = 883
Score = 207 bits (506), Expect = 6e-54
Identities = 102/129 (79%), Positives = 113/129 (87%)
Frame = +2
Query: 113 SNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTK 292
SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 293 LFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDAS 472
LFQSK+++LRRMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD +
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 473 MLQAIERYM 499
MLQA+ERYM
Sbjct: 141 MLQAVERYM 149
>AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB,
isoform B protein.
Length = 883
Score = 207 bits (506), Expect = 6e-54
Identities = 102/129 (79%), Positives = 113/129 (87%)
Frame = +2
Query: 113 SNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTK 292
SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 293 LFQSKEIMLRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDAS 472
LFQSK+++LRRMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD +
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNT 140
Query: 473 MLQAIERYM 499
MLQA+ERYM
Sbjct: 141 MLQAVERYM 149
>BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p
protein.
Length = 1159
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 QEATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVT-SSLTKDMTGKEDLYRA 433
++A+D F A K SK I ++++VY+ + ++ QD+ +++ S+ + + L RA
Sbjct: 55 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 114
Query: 434 AAIRALCSI 460
+A+R L SI
Sbjct: 115 SALRVLSSI 123
>AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protein
protein.
Length = 1160
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 QEATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVT-SSLTKDMTGKEDLYRA 433
++A+D F A K SK I ++++VY+ + ++ QD+ +++ S+ + + L RA
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 434 AAIRALCSI 460
+A+R L SI
Sbjct: 135 SALRVLSSI 143
>AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.
Length = 1160
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 QEATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVT-SSLTKDMTGKEDLYRA 433
++A+D F A K SK I ++++VY+ + ++ QD+ +++ S+ + + L RA
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 434 AAIRALCSI 460
+A+R L SI
Sbjct: 135 SALRVLSSI 143
>AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA
protein.
Length = 1160
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 QEATDAFFATTKLFQSKEIMLRRMVYLCIKELSKLAQDVIIVT-SSLTKDMTGKEDLYRA 433
++A+D F A K SK I ++++VY+ + ++ QD+ +++ S+ + + L RA
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 134
Query: 434 AAIRALCSI 460
+A+R L SI
Sbjct: 135 SALRVLSSI 143
>L31852-1|AAA21090.1| 962|Drosophila melanogaster bcop protein.
Length = 962
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 356 KLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 487
KL Q++I+V + KD+ + R + +R LC + + +L+ +
Sbjct: 91 KLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPL 134
>AF145656-1|AAD38631.1| 964|Drosophila melanogaster BcDNA.GH09317
protein.
Length = 964
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 356 KLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 487
KL Q++I+V + KD+ + R + +R LC + + +L+ +
Sbjct: 91 KLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPL 134
>AE014298-2708|AAF48830.2| 964|Drosophila melanogaster CG6223-PA
protein.
Length = 964
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 356 KLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 487
KL Q++I+V + KD+ + R + +R LC + + +L+ +
Sbjct: 91 KLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPL 134
>AY070711-1|AAL48182.1| 687|Drosophila melanogaster SD04925p
protein.
Length = 687
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +2
Query: 173 QTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTKLFQSKEIMLRRMVYLCIKEL 352
+ L++ + SLI+ K+ LLN + T A F S + L M+ L EL
Sbjct: 448 EKLILENRASLIIRKLCVLLNAEYIYRTFAEIIAEGVPNLKFASTVVRLLNMILLTSTEL 507
Query: 353 SKLAQDVIIVTSSLTKDM 406
+L + +++ + D+
Sbjct: 508 FELRTSLRNISNEKSADL 525
>AE014297-1538|AAF54829.1| 687|Drosophila melanogaster CG5608-PA
protein.
Length = 687
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +2
Query: 173 QTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTKLFQSKEIMLRRMVYLCIKEL 352
+ L++ + SLI+ K+ LLN + T A F S + L M+ L EL
Sbjct: 448 EKLILENRASLIIRKLCVLLNAEYIYRTFAEIIAEGVPNLKFASTVVRLLNMILLTSTEL 507
Query: 353 SKLAQDVIIVTSSLTKDM 406
+L + +++ + D+
Sbjct: 508 FELRTSLRNISNEKSADL 525
>AE014296-13|AAF47333.2| 480|Drosophila melanogaster CG6845-PA,
isoform A protein.
Length = 480
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 169 KLSCFLKYYSFIEILVWVTAVIIF 98
+LS F+ SF++IL WV V +F
Sbjct: 113 RLSSFIFLSSFVDILCWVMVVTVF 136
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,080,737
Number of Sequences: 53049
Number of extensions: 306923
Number of successful extensions: 769
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -