Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f14
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.73 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.8  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 284 FIFCIHILVVNLNWSAVVYLKLLGIL 207
           F+ C+ +    + W  +VY+  LGI+
Sbjct: 260 FVICVLVQSEKIVWLHLVYISFLGII 285


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 284 FIFCIHILVVNLNWSAVVYLKLLGIL 207
           FI C+ +    + W  ++Y+ L+GI+
Sbjct: 616 FIICVIVQSEQIAWLHLLYIFLVGIM 641


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 454 TCTAPLDRLKVFLQVNTTRENMRKCLAKMLNE 549
           TC A +     FL     R N  K  +++LNE
Sbjct: 216 TCEAVMILRSRFLDARRKRRNFSKQASEILNE 247


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 271 IQKMNRKKLYKDDQDEDDLNDT 336
           I K   + +  DD D+DD++++
Sbjct: 279 IDKEEHESMDDDDDDDDDMSNS 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,868
Number of Sequences: 336
Number of extensions: 3728
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)