Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f13
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.16 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.5  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 214 YCCF*DSLQPVKNILYINVSSPAP 143
           YC F  SL P+K+  Y+NV  P P
Sbjct: 313 YCAF--SLYPLKSTFYLNVVRPFP 334


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 616 KKFGSWMFGKGCHRTQNLTKKPQNEL 693
           +K  S   G   H+T +L K P+N L
Sbjct: 262 EKKSSIQHGDDAHKTHHLDKNPENTL 287


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 583 TLVLAFIGFMYKKFGSWMFGKGCHRT 660
           T V+ F G  +  F  ++ GK  HR+
Sbjct: 3   TFVILFFGVFFIIFSDFVNGKTLHRS 28


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 82  SEVILLNNLFASCAFFDVFVKE 17
           +++ LL  LFA   + D+F++E
Sbjct: 137 AQLDLLEGLFAKTRYPDIFMRE 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,362
Number of Sequences: 336
Number of extensions: 3840
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)