Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f13
         (731 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23660.2 68417.m03407 UbiA prenyltransferase family protein s...    27   9.7  
At4g23660.1 68417.m03406 UbiA prenyltransferase family protein s...    27   9.7  
At2g40230.1 68415.m04947 transferase family protein similar to t...    27   9.7  

>At4g23660.2 68417.m03407 UbiA prenyltransferase family protein
           similar to para-hydroxybenzoate--polyprenyltransferase,
           mitochondrial [Precursor] [Saccharomyces cerevisiae],
           SP|P32378; contains PF01040 UbiA prenyltransferase
           family domain
          Length = 407

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 553 SNWLRVLGGSTLVLAFIGFMYKKFGSW 633
           +N+ RVLG S+L+L F   + K+F  W
Sbjct: 231 NNYSRVLGASSLLLVFSYPLMKRFTFW 257


>At4g23660.1 68417.m03406 UbiA prenyltransferase family protein
           similar to para-hydroxybenzoate--polyprenyltransferase,
           mitochondrial [Precursor] [Saccharomyces cerevisiae],
           SP|P32378; contains PF01040 UbiA prenyltransferase
           family domain
          Length = 407

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 553 SNWLRVLGGSTLVLAFIGFMYKKFGSW 633
           +N+ RVLG S+L+L F   + K+F  W
Sbjct: 231 NNYSRVLGASSLLLVFSYPLMKRFTFW 257


>At2g40230.1 68415.m04947 transferase family protein similar to
           taxadienol acetyl transferase from Taxus cuspidata
           [gi:6978038]; contains Pfam transferase family domain
           PF002458
          Length = 433

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 221 VGVLLFLRFSAAGEEHLIYQC*QSSSQDNACCDRHPVISIPVTHNN 84
           VGVL+  ++S  G E L +   +     + CCDR+ ++ +P+   N
Sbjct: 363 VGVLILSQWSRLGLEKLDFGLGKPVHVGSVCCDRYCLL-LPIPEQN 407


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,876,598
Number of Sequences: 28952
Number of extensions: 303076
Number of successful extensions: 684
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)