Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f11
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55990.1 68416.m06221 expressed protein contains Pfam profile... 31 0.51
At5g17910.1 68418.m02100 expressed protein 31 0.67
At1g11400.2 68414.m01310 expressed protein 30 1.2
At1g11400.1 68414.m01309 expressed protein 30 1.2
At3g06670.1 68416.m00786 expressed protein 29 2.0
At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UD... 29 3.6
At5g27330.1 68418.m03263 expressed protein 28 4.7
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 28 6.2
At3g20150.1 68416.m02554 kinesin motor family protein contains P... 28 6.2
At1g71760.1 68414.m08294 hypothetical protein 28 6.2
At1g71150.1 68414.m08210 expressed protein ; expression support... 28 6.2
At5g35810.1 68418.m04303 hypothetical protein 27 8.2
At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family pr... 27 8.2
At3g30370.1 68416.m03834 hypothetical protein 27 8.2
>At3g55990.1 68416.m06221 expressed protein contains Pfam profile
PF03005: Arabidopsis proteins of unknown function
Length = 487
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 62 SEKPASSEDKDTPIRQIMTI-IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKY 238
+ KP D+ TPI +I T+ ++ I+N + + + + +Q + K++ + V+K
Sbjct: 56 TSKPHDVHDEATPITEITTLPVQESIKNSDPIQESIKNADSVQDSVKDVAEPVQEEVSKT 115
Query: 239 DEVAQTLEFA 268
+EV + FA
Sbjct: 116 EEVKKIELFA 125
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 104 RQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 262
RQ+ + E K+ ++ +S T D +K E N+D++ +AK D V+ E
Sbjct: 524 RQLSEVSESKVSSIPDTESVCTVLEDDEKKVDENNADRETKIAKVDMVSDNDE 576
>At1g11400.2 68414.m01310 expressed protein
Length = 204
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 122 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 274
+E +IR L K+K +LT + + A ++LN +Q +K +E Q L+ D
Sbjct: 152 VEKRIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201
>At1g11400.1 68414.m01309 expressed protein
Length = 204
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 122 IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 274
+E +IR L K+K +LT + + A ++LN +Q +K +E Q L+ D
Sbjct: 152 VEKRIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201
>At3g06670.1 68416.m00786 expressed protein
Length = 865
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/76 (26%), Positives = 30/76 (39%)
Frame = +2
Query: 44 SAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKV 223
SA+N + EKPAS+ K+ P + + + R L Y D + +K
Sbjct: 672 SASNTQKEKPASNIQKEQPKPHLSNGVAASPTSSSPRSGGLVDYEDDEDDEDYKPPPRKQ 731
Query: 224 AVAKYDEVAQTLEFAR 271
A DE + L R
Sbjct: 732 PEASEDEEGELLRLKR 747
>At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative similar to sucrose
synthase GI:6682841 from [Citrus unshiu]
Length = 942
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 161 KLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSKQVT 292
KL L +++N DQK A +Y E+ L+F + L+K+VT
Sbjct: 766 KLLKMGSLYGFWRQVNEDQKKAKKRYIEMLYNLQF-KQLTKKVT 808
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 86 DKDTPIRQIMTIIEHKIRNLEKRK---SKLTSYRDLQKAGKELNSDQ 217
D++T IR + IR LE + S++ RDL K+G +L S++
Sbjct: 141 DRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEE 187
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 137 RNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLS 280
RN++K+KSKL D GKE + K + +T EF R L+
Sbjct: 649 RNMDKKKSKLVGIVD-DDGGKESKDKESKDRFKDIRIERTDEFGRTLT 695
>At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1114
Score = 27.9 bits (59), Expect = 6.2
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 50 ANAKSEKPASSEDKDTPIRQIM---TIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQK 220
A K EK +S E +D R ++ +EH L+++ + L S KA E ++ K
Sbjct: 923 AQLKQEKLSSEELEDALRRAVLGHARFVEH-YTELQEKYNDLCSKH---KATVEWITELK 978
Query: 221 VAVAKYDEVAQTLEFARDLSKQVTAIAI 304
AVAK + FA+ L+ +++A+ +
Sbjct: 979 KAVAKAGKKGCGSRFAKSLASELSALRV 1006
>At1g71760.1 68414.m08294 hypothetical protein
Length = 259
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 443 FINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEE 547
F+ N + K+ +++ + D +PEV + E+NEE
Sbjct: 56 FVQSFNMSRKVADEEAHAVGDSFPEVYVEGEVNEE 90
>At1g71150.1 68414.m08210 expressed protein ; expression supported
by MPSS
Length = 351
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 50 ANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKR 154
++ KS K +SSE R++ ++IEH + L+ R
Sbjct: 303 SDVKSSKNSSSEALSGSCRRLQSLIEHMVTELDTR 337
>At5g35810.1 68418.m04303 hypothetical protein
Length = 347
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 477 VNLAAPFVPFMKSVLASALPICIRQSRISKTSFILLVSAA*RTQASFLACFF 322
+ L A FV + VLA + + + + K S ILLV A T SF+ F
Sbjct: 270 LGLLALFVSIISMVLAFTATLILIRDQEPKWSLILLVYVASATALSFVVLHF 321
>At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 296
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +2
Query: 116 TIIEHKIRNLEKRKSKLT-SYRDL-QKAGKELNSDQ 217
++++H+IRN + K ++T Y++L KA E NSD+
Sbjct: 115 SLLDHEIRNHKSSKEQITQDYKNLTSKAQLEENSDE 150
>At3g30370.1 68416.m03834 hypothetical protein
Length = 179
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 482 DDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLY 598
D+ +I D+YPE E N+E ++ F + R HLY
Sbjct: 35 DEPQIHHDVYPE--SDREENDEDEARFQTHLQRGDGHLY 71
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,714,509
Number of Sequences: 28952
Number of extensions: 226387
Number of successful extensions: 623
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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