Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10f07
         (619 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VTP1 Cluster: CG14130-PA; n=4; Diptera|Rep: CG14130-P...   124   2e-27
UniRef50_Q9BT30 Cluster: Alkylated DNA repair protein alkB homol...   111   1e-23
UniRef50_Q7YWP5 Cluster: Putative uncharacterized protein; n=2; ...   101   2e-20
UniRef50_UPI00005A3D82 Cluster: PREDICTED: similar to spermatoge...    94   2e-18
UniRef50_UPI00006A12B9 Cluster: spermatogenesis associated 11; n...    85   2e-15
UniRef50_UPI0000E4938C Cluster: PREDICTED: similar to AlkB, alky...    75   1e-12
UniRef50_Q5KJN7 Cluster: Putative uncharacterized protein; n=1; ...    38   0.19 
UniRef50_Q9D6Z0-2 Cluster: Isoform 2 of Q9D6Z0 ; n=3; Eutheria|R...    37   0.33 
UniRef50_Q4Q7Z1 Cluster: Putative uncharacterized protein; n=5; ...    37   0.44 
UniRef50_Q8IRX3 Cluster: CG14798-PB, isoform B; n=2; Drosophila ...    36   0.77 
UniRef50_Q5KH57 Cluster: Putative uncharacterized protein; n=2; ...    33   7.2  
UniRef50_UPI00006CDD9E Cluster: ATPase, histidine kinase-, DNA g...    32   9.5  
UniRef50_Q5MPX4 Cluster: Transferrin receptor 1a; n=6; Clupeocep...    32   9.5  
UniRef50_Q2W0P6 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_A1ZZ57 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  

>UniRef50_Q9VTP1 Cluster: CG14130-PA; n=4; Diptera|Rep: CG14130-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 255

 Score =  124 bits (298), Expect = 2e-27
 Identities = 52/107 (48%), Positives = 74/107 (69%)
 Frame = +2

Query: 299 QDMQVYPGFVTXXXXXXXXXXXXPYLKRMRYEFDHWDDAIQGFRETERSQFKPENQVILD 478
           Q M++   F++            PY+ R+RYEFDHWDDAI GFRETER ++ P+N+ IL+
Sbjct: 48  QHMRIITDFISEPEEQQLHEEIEPYMSRLRYEFDHWDDAIHGFRETERKKWFPKNREILE 107

Query: 479 RVKALAFTTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCS 619
           RV+ +AF    +P+VH+LDLA  G IKPH+D+ R+CG+ I+G+ L S
Sbjct: 108 RVRQVAFDGAVMPYVHILDLAPDGVIKPHVDSTRYCGNTISGISLLS 154


>UniRef50_Q9BT30 Cluster: Alkylated DNA repair protein alkB homolog
           7 precursor; n=11; Eumetazoa|Rep: Alkylated DNA repair
           protein alkB homolog 7 precursor - Homo sapiens (Human)
          Length = 221

 Score =  111 bits (268), Expect = 1e-23
 Identities = 55/125 (44%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
 Frame = +2

Query: 251 PTWDTDIKPELRAAVLQDMQVYPGFVTXXXXXXXXXXXXPYLKRMRYEFDHWDDAIQGFR 430
           P+W     P + + +     V PGF++            P L+R RYE+DHWD AI GFR
Sbjct: 15  PSWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFR 74

Query: 431 ETERSQFKPENQVILDRVKALAF--TTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAG 604
           ETE+S++   ++ IL RV+A AF      L  VHVLDL A G+IKPH+D+++FCG  IAG
Sbjct: 75  ETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDSIKFCGATIAG 134

Query: 605 VCLCS 619
           + L S
Sbjct: 135 LSLLS 139


>UniRef50_Q7YWP5 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 227

 Score =  101 bits (241), Expect = 2e-20
 Identities = 46/101 (45%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
 Frame = +2

Query: 323 FVTXXXXXXXXXXXXPYLKRMRYEFDHWDDAIQGFRETERSQFKPENQVILDRVKALAF- 499
           F+T            P++KR+RYE  HWDDAI  +RE E+ +++ EN  ++ R+++ +F 
Sbjct: 38  FITEAEEKSLLVDVEPHMKRLRYEKSHWDDAIHLYREREQRKWRDENLEVISRIRSESFG 97

Query: 500 -TTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCS 619
             T+ L +VH+LDL   G IKPHIDA+R+CGDVI GV L S
Sbjct: 98  ANTEHLTYVHILDLHKDGVIKPHIDAIRYCGDVITGVSLLS 138


>UniRef50_UPI00005A3D82 Cluster: PREDICTED: similar to
           spermatogenesis associated 11 isoform 3; n=1; Canis
           lupus familiaris|Rep: PREDICTED: similar to
           spermatogenesis associated 11 isoform 3 - Canis
           familiaris
          Length = 131

 Score = 94.3 bits (224), Expect = 2e-18
 Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = +2

Query: 251 PTWDTDIKPELRAAVLQDMQVYPGFVTXXXXXXXXXXXXPYLKRMRYEFDHWDDAIQGFR 430
           P W     P + + +     V PGF++            P L+R RYE+DHWD AI GFR
Sbjct: 15  PGWVRGSGPAVLSRLRDAAVVRPGFLSAAEEETLSRELEPELRRRRYEYDHWDAAIHGFR 74

Query: 431 ETERSQFKPENQVILDRVKALAFT--TDTLPHVHVLDLAAAGFIKPHIDAVRFCG 589
           ETE+S++   ++ IL RV+A AF+     L  VHVLDL   G+IKPH+D+++  G
Sbjct: 75  ETEKSRWSEASRAILQRVQAAAFSPGQTLLSSVHVLDLEPRGYIKPHVDSIKGLG 129


>UniRef50_UPI00006A12B9 Cluster: spermatogenesis associated 11; n=3;
           Coelomata|Rep: spermatogenesis associated 11 - Xenopus
           tropicalis
          Length = 139

 Score = 84.6 bits (200), Expect = 2e-15
 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +2

Query: 413 AIQGFRETERSQFKPENQVILDRVKALAFTT--DTLPHVHVLDLAAAGFIKPHIDAVRFC 586
           AI GFRETER Q+ PEN  +L RV+  AF    + L  VHVLDL   G+IK H+D+V+FC
Sbjct: 1   AIHGFRETERLQWSPENSAVLQRVREKAFPPGEEQLSLVHVLDLKKEGYIKAHVDSVKFC 60

Query: 587 GDVIAGVCLCS 619
           G  IAG+CL S
Sbjct: 61  GSTIAGICLLS 71


>UniRef50_UPI0000E4938C Cluster: PREDICTED: similar to AlkB,
           alkylation repair homolog 7 (E. coli), partial; n=2;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           AlkB, alkylation repair homolog 7 (E. coli), partial -
           Strongylocentrotus purpuratus
          Length = 203

 Score = 75.4 bits (177), Expect = 1e-12
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +2

Query: 413 AIQGFRETERSQFKPENQVILDRVKALAFTTDT--LPHVHVLDLAAAGFIKPHIDAVRFC 586
           AI GFRETE+S++   N  I+ R++  AF   +  L  VHVLDLA  G+IKPH+D+++FC
Sbjct: 57  AIHGFRETEKSRWSEVNSPIIQRIRDQAFPEGSAQLTLVHVLDLAQNGYIKPHVDSIKFC 116

Query: 587 GDVIAGVCLCS 619
           G  IAG+ L S
Sbjct: 117 GSTIAGLSLLS 127


>UniRef50_Q5KJN7 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 287

 Score = 37.9 bits (84), Expect = 0.19
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 20/95 (21%)
 Frame = +2

Query: 389 YEFDHWDDAIQGFRETERSQFKPENQVILD----RVKALAFTT-DTLPH----------- 520
           +E  H+D  I G+RE+  S   P    +L     R+ +L F++   LPH           
Sbjct: 106 FEEGHYDSVIHGYRESLLSTLPPSPHPLLAPTLRRIYSLFFSSLPALPHSTTHTETPLPP 165

Query: 521 ----VHVLDLAAAGFIKPHIDAVRFCGDVIAGVCL 613
                H+L L+  G I PH+D +   G VI GV L
Sbjct: 166 AGTLTHILHLSPTGAILPHVDNLEASGRVILGVSL 200


>UniRef50_Q9D6Z0-2 Cluster: Isoform 2 of Q9D6Z0 ; n=3; Eutheria|Rep:
           Isoform 2 of Q9D6Z0 - Mus musculus (Mouse)
          Length = 163

 Score = 37.1 bits (82), Expect = 0.33
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 311 VYPGFVTXXXXXXXXXXXXPYLKRMRYEFDHWD 409
           V+PGF++            P L+R RYE+DHWD
Sbjct: 35  VHPGFLSQEEEDTLTRELEPQLRRRRYEYDHWD 67


>UniRef50_Q4Q7Z1 Cluster: Putative uncharacterized protein; n=5;
           Trypanosomatidae|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 286

 Score = 36.7 bits (81), Expect = 0.44
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +2

Query: 521 VHVLDLAAAGFIKPHIDAVRFCGDVIAGVCL 613
           VH L LA +GFI+ H+D  R    ++AG+CL
Sbjct: 154 VHFLRLAGSGFIRAHVDESRNSTGIVAGLCL 184


>UniRef50_Q8IRX3 Cluster: CG14798-PB, isoform B; n=2; Drosophila
           melanogaster|Rep: CG14798-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 237

 Score = 35.9 bits (79), Expect = 0.77
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +3

Query: 438 NAASSSQRTKSYWTALKR*PSQPTHYRTCTSWTWPPLGS*SRILTLSD 581
           NA S   +T+  W   +  PS      +CTSWTW  L   SR  T  D
Sbjct: 87  NAESGLPKTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 134


>UniRef50_Q5KH57 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 287

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +3

Query: 216 NLKEIPITLKYL-QRGTQISSLSYELLYSRICKCTQASSL 332
           N +E+PI L+YL Q+G +++S S  L+Y  + KC    SL
Sbjct: 208 NKEEVPIALRYLQQQGVEVTS-SESLIYRLLGKCHDGPSL 246


>UniRef50_UPI00006CDD9E Cluster: ATPase, histidine kinase-, DNA
           gyrase B-, and HSP90-like domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           containing protein - Tetrahymena thermophila SB210
          Length = 951

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +3

Query: 216 NLKEIPITLKYLQRGTQISSLSYELLYSRICKC-TQASSLKK 338
           NLK+    L  L++  Q+SS+  E L+S I KC  Q+SSL+K
Sbjct: 321 NLKQQLQKLIILRKKEQVSSIQQESLHSYILKCDNQSSSLRK 362


>UniRef50_Q5MPX4 Cluster: Transferrin receptor 1a; n=6;
           Clupeocephala|Rep: Transferrin receptor 1a - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 770

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +2

Query: 143 TLKSFFNGKPRKYSRVTQTEPKIPQLKGDPNYIEISPTWDTDIKPE 280
           T+   FNG+PR Y+R   T+     ++GD +++E+  + D D + E
Sbjct: 7   TISKIFNGEPRSYTRFNLTQ----NMEGDNSHVEMKLSSDMDEEVE 48


>UniRef50_Q2W0P6 Cluster: Putative uncharacterized protein; n=1;
           Magnetospirillum magneticum AMB-1|Rep: Putative
           uncharacterized protein - Magnetospirillum magneticum
           (strain AMB-1 / ATCC 700264)
          Length = 562

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 161 NGKPRKYSRVTQTEPKIPQLKG--DPNYIEISPTWDTDIKPELR 286
           N K R  +R T+  P IP LK   DP+  E SPT D + K + R
Sbjct: 67  NKKVRATARGTKASPYIPTLKAFFDPSLDECSPTTDDEKKDKAR 110


>UniRef50_A1ZZ57 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 465

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +2

Query: 128 FLKNCTLKSFF--NGKPRKYSRVTQTEPKIPQLKGDPNYIEIS 250
           +   C L+S F  NG+ R + +++Q   K+ + KG PNY+ ++
Sbjct: 214 YTARCNLRSEFTVNGQTRPFDKISQMLLKLSEDKGTPNYLAMA 256


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,747,772
Number of Sequences: 1657284
Number of extensions: 11511570
Number of successful extensions: 30895
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30882
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)