Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10f05
(405 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22334| Best HMM Match : VAR1 (HMM E-Value=1.9) 31 0.36
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 30 0.82
SB_14614| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_50628| Best HMM Match : Abi (HMM E-Value=1.5) 29 1.4
SB_19016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07) 28 2.5
SB_25939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_56915| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_52905| Best HMM Match : MM_CoA_mutase (HMM E-Value=2.6e-07) 27 4.4
SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38) 27 4.4
SB_50754| Best HMM Match : Protamine_P2 (HMM E-Value=3.6) 27 5.8
SB_14831| Best HMM Match : DUF309 (HMM E-Value=9.4) 27 5.8
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 27 7.7
SB_29458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_10576| Best HMM Match : La (HMM E-Value=6.9e-28) 27 7.7
>SB_22334| Best HMM Match : VAR1 (HMM E-Value=1.9)
Length = 525
Score = 31.1 bits (67), Expect = 0.36
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = -1
Query: 300 PCLLRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSP---VEQSQALWSIS 130
PC ES R++ P HT RI+ + EPYWR+ H + +Q + +S
Sbjct: 16 PCCWNPESTRKNPHGIRNP-HT---RIR-----NPEPYWRTCHGANKNITKQRRVNIPVS 66
Query: 129 -LSVFRCCSYLQEYKMSLLLYFV*PNKLNKLNFISSNQINFD 7
LS+ R S L + L+Y V + +L+ +SS++ FD
Sbjct: 67 FLSILRIYSRLYITTSNALIYTVSASINKRLSTLSSDKETFD 108
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 313 PLTIPMLVTERKPTSKHTATVKTITYVKIQNKTAYTNIHRAVLAF 179
P+ + P H +T VKI N A+T + AVLAF
Sbjct: 1440 PIAVANKTLTTPPAWSHVTVQPDMTSVKISNLAAFTRYNLAVLAF 1484
>SB_14614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.9 bits (64), Expect = 0.82
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 300 PCLLRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIH 172
PC + +R R Q R++ HT RI+ + EPYWR+ H
Sbjct: 177 PCYWNTHTRIRKPQTRIRNPHT---RIR-----NPEPYWRTCH 211
>SB_50628| Best HMM Match : Abi (HMM E-Value=1.5)
Length = 151
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = -1
Query: 279 SRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVFRCCSYL 100
SR + P L H + +PT+ P W P +W+I +SV CC Y
Sbjct: 72 SRAKWNGPELS-RHRFRKVPFSSVPTA--PKWYRFQIVPFSVIVFVWTIPVSVVLCCCYF 128
Query: 99 QEYKMS 82
+S
Sbjct: 129 AAKNLS 134
>SB_19016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 273
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 174 EWNANTALWMLVYAVLFWILTYVMVLTV 257
+W A TA + L+Y V +I Y++ L+V
Sbjct: 120 DWPAPTATYRLIYTVFIFIAQYIIPLSV 147
>SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07)
Length = 2435
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 298 WVLSMVTTDL*IICITVQNICIKIGGNKLVRITK 399
W++S++ L + C+T IC+ I G++ ++K
Sbjct: 582 WLVSIILALLLLFCVTANKICLLIIGHEYSTLSK 615
>SB_25939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +3
Query: 144 ELGFVQQDYNEWNANTALWMLVYAVLFWILTYVMVLTVAV 263
++ F ++ +E N NT +W ++ +F+IL + V +
Sbjct: 481 DMAFDEKTEDEHNNNTNMWQNIFRAVFYILLFPFWFAVTI 520
>SB_56915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 720
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 249 KPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWS 136
KP ++ S KQ + TSTE WR C+ V S +++
Sbjct: 42 KPWSSVDSESKQRVVTSTEAPWRI--CNTVSTSSRMYA 77
>SB_52905| Best HMM Match : MM_CoA_mutase (HMM E-Value=2.6e-07)
Length = 190
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 54 YLATQNIAAMTSYTPEDMNNIE 119
+L +NIA +YT ED+ N+E
Sbjct: 23 FLTAENIAVKKTYTEEDIENLE 44
>SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38)
Length = 253
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 209 YQHPQSRIGVPFIVVLLNKAKLYGAFLFRCFDVVHIFRSI 90
Y H Q R V +V+ A LYGA D++H++RSI
Sbjct: 217 YGHAQCRYFVRVLVITRLHAMLYGA-----HDLLHLYRSI 251
>SB_50754| Best HMM Match : Protamine_P2 (HMM E-Value=3.6)
Length = 291
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 273 RRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCS 166
RR TQ +K + S + +HI T + S+HCS
Sbjct: 106 RRVTQAAMKTLRSTASGVTEHIFTEDDIISPSLHCS 141
>SB_14831| Best HMM Match : DUF309 (HMM E-Value=9.4)
Length = 219
Score = 27.1 bits (57), Expect = 5.8
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -3
Query: 286 ERKPTSKHTATVKTITYVKIQNKTAYTNIH 197
+++ + T T+K ++K N+ Y+N+H
Sbjct: 81 QKRTLGRRTDTIKDAAFLKDDNEAPYSNVH 110
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +3
Query: 195 LWMLVYAVLFWILTYVMVLTVAVCFDVGFRSVTSMGIVNGHNRSVNYLYYGAKHLY 362
LW+ ++ +LF ++ V + +C+ F T ++ ++ Y+Y G K L+
Sbjct: 1278 LWIGIWTMLFCLILVVTDASAMICYFTRFTEETFATLI-----AIIYIYEGFKKLF 1328
>SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1408
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 267 FDVGFRSVTSMGIVNGHNRSVNYLYYGAKHLY*NW 371
FD FR++ S GIVN + SV LY+ L W
Sbjct: 47 FDFRFRTLFSKGIVN-YTISVKPLYFTPSQLTVRW 80
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 237 YVMVLTVAVCFDVGFRSVTSMGIVNGH--NRSVNYLYYGAKHL 359
Y +T+ VC GF + I GH N ++ L G HL
Sbjct: 773 YASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHL 815
>SB_29458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 285 SESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIH 172
S +RRR + R +K R + ++P P R IH
Sbjct: 56 SSNRRRKSSVRFSVQDVMKGRRESNVPRDRIPAARGIH 93
>SB_10576| Best HMM Match : La (HMM E-Value=6.9e-28)
Length = 711
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 75 AAMTSY--TPEDMNNIETPKEKCSIELGFVQQDYNEWN 182
AA+ SY TP+ + + E P + E GF QQ Y++++
Sbjct: 544 AAVGSYGSTPQSIPHFEHPSHRLLKENGFTQQLYHKFH 581
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,153,093
Number of Sequences: 59808
Number of extensions: 280374
Number of successful extensions: 840
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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